Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20domesticum_20[genbank_20GCA_5F001599015.1_202016-03- 01] 28 sequences; 24,510,922 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2 102 6e-17 >seq2 Length=3730214 Score = 102 bits (112), Expect = 6e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 33523 GCCGATGGGTGCAAATGCGTCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGC 33582 ||||| || ||| | ||||||||| | ||| || || || || |||| ||| Sbjct 3251435 GCCGACGGTCTCAAGTTTGTCAAGATCCGCATCCGCTCGACGCGTATCCCCCAGATTGGC 3251376 Query 33583 GACAAGTTTGCATCGT-TCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCAGTG 33641 ||||||||||| ||| |||||| | ||||||| || || || | |||| |||| Sbjct 3251375 GACAAGTTTGCGTCGCGTCACGGAC-AGAAGGGTACCATTGGTATTACGTACCGCCAGGA 3251317 Query 33642 GGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTT 33701 |||||||||||| || ||||| || | || |||||| | ||||||||||||| || | Sbjct 3251316 GGACATGCCGTTTACTGCCGAGGGAATTGTGCCGGACATTATCATCAACCCGCACGCCAT 3251257 Query 33702 CCCCTCGCGCATGAC 33716 || ||||| ||||| Sbjct 3251256 TCCGTCGCGTATGAC 3251242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233478435284