Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20domesticum_20[genbank_20GCA_5F001599015.1_202016-03- 01] 28 sequences; 24,510,922 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 4e-14 >seq1 Length=4014173 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 21138 GACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTG 21197 |||||| || || ||||||||||| ||||| | || |||| | ||||| | | || Sbjct 3974980 GACGTTTCCGAGGTCGCCGACGTGACGCTCCGACGCCGAGGGACCTCCGTGCTGCTTGTT 3974921 Query 21198 CGTAGGGTTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGTG 21257 | |||||| | || ||||||| |||||||| |||||||||||||| || || |||| Sbjct 3974920 CTGGGGGTTATAATGGGCGCCGGCAGACGTGCATCCGTTGCTGGTGTCTCCAAAAGCGTG 3974861 Query 21258 AACGTGAAAGCCGTGC 21273 | ||| |||||| || Sbjct 3974860 GATGTGGAAGCCGCGC 3974845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572658527032