Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20domesticum_20[genbank_20GCA_5F001599015.1_202016-03- 01] 28 sequences; 24,510,922 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq11 89.7 4e-13 >seq11 Length=562504 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| ||||| || | || ||||| || || || | ||| ||| | | Sbjct 29281 ATGCAGATTTTCGTCAAGACCCTCACTGGCAAGACTATCACTCTTGAAGTTGAGTCGTCC 29340 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| ||| | | || || |||||| || || || ||| | ||| || ||| Sbjct 29341 GACACTATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 29400 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || || | ||||| || ||||| ||||||| | || | | ||||||||| Sbjct 29401 CAGCGTCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACTCTTTCCGACTACAAC 29460 Query 107736 ATTCAAAAGGAGTCTACGTTGCAC 107759 ||||| |||||||| ||||||||| Sbjct 29461 ATTCAGAAGGAGTCGACGTTGCAC 29484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876663883292