Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20domesticum_20[genbank_20GCA_5F001599015.1_202016-03-
01] 28 sequences; 24,510,922 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 6e-31
seq11 122 8e-23
seq2 118 1e-21
seq3 87.8 2e-12
>seq1
Length=4014173
Score = 149 bits (164), Expect = 6e-31
Identities = 1173/1852 (63%), Gaps = 81/1852 (4%)
Strand=Plus/Plus
Query 147951 GTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCG-CCATGCGTAGTCGTGCACCGA 148009
|| || || ||||||||||| ||||| || || | || ||| |||| ||||| ||
Sbjct 2025353 GTACGAAGGTAGTACATGCCGGTCTTAAGACC-ACGCTTCCAGCCGTAAAAGTGCATGGA 2025411
Query 148010 CGACATGAGC---GTGTACGTCGGGTGCGGCACAAACAGATTAAACGACTGGCTCTGGTC 148066
| ||||| | | ||| |||| || || | || | |||||| ||||||
Sbjct 2025412 AG---TGAGCTGAGAGAACGAAGGGTTCGACAGGTGGATGTTGAGCGACTGCGACTGGTC 2025468
Query 148067 AATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCATCTCCCAGGC 148126
|| || || |||||||| ||||| | || || | | ||| | ||||||||| |
Sbjct 2025469 GATAAAAGCACCACGGTCGGCGGCAAGGTCGATAACTGCCTTCTGCGAAATCTCCCAGAC 2025528
Query 148127 CGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGC- 148185
|||||||| | | |||||| | ||||||||| || ||| |||| | ||| || |
Sbjct 2025529 AGTCTTGTAGATCGACTTGATCTCATCGGGAATTCCAGGAATGTGCTGGATCGAACCACC 2025588
Query 148186 -GGTGCGCAAAA-ATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTC 148243
| ||| | | ||| || | |||||| | |||| ||| | ||| |||||
Sbjct 2025589 CGAGGCGATGACGAGCTGCTTCATGTTGTCGTCCCAG---AGGTCGAGGTTGATGAGGTC 2025645
Query 148244 ATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACAC 148303
| | || | | || ||||| || || || | |||||| || || || |
Sbjct 2025646 ACGAAGGAGCCAGGGGCAGACGACCTGGAAGTCACCAGAGAGCACACGGCGGGAGTAGAG 2025705
Query 148304 GTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGT 148363
| || | || || || ||||||| ||| | |||||| | || | || ||
Sbjct 2025706 CATCGAGGTGTAAGGCTCGAAGCACTCGTTCCAGCCAAGAATCTGAGAAGTGGAAGCAGT 2025765
Query 148364 GGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAG 148423
|||||| || || || ||||||||||| | ||| || || || | | | |
Sbjct 2025766 AGGCATGGGGGCGACGAGAAGCGAGTTGCGAACGCCGTTCTTGGCGATCTT-CTCA-CGG 2025823
Query 148424 AGC-CG-CCCAGTCCCAGAGCGGCGACGGTGTCACGTTCC-ACATGTCGTACTGCAGAAT 148480
||| || |||||| |||||| | || || | ||| || | | ||| |||| || |
Sbjct 2025824 AGCTCGTCCCAGTTCCAGAG-GTCGGTGGGGATACGGCCCCAAAGGTCAAACTGGAGCTT 2025882
Query 148481 GCCGCGGCTAGCGGGGCTG-CCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTT 148539
||| | || || |||| |||||||| || ||| | ||| | || |||| |
Sbjct 2025883 GCC-CTGCGAGATGGGCGAACCCTCGTATGAAGGGTAGGTTCCAACCTCCTGGGCCATCT 2025941
Query 148540 CGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCG 148599
| || ||||||||| || ||| ||| || |||||| || || ||||||| | |
Sbjct 2025942 CACACGACGCCTCGAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGGAGGTTGAGCTG-G 2026000
Query 148600 CCGCCGACTCGCTT-TCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGT 148658
| || | || ||| | ||||| || || || || ||||||||||| |||||
Sbjct 2026001 CGAGCGGCAGGCGAGTCGAAGGGCATGCGGAGGGCCATGAAGGCGTCGGCAAGACCCTGG 2026060
Query 148659 ACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCGGA-TA 148717
|| || | || | ||| || || ||||| ||| || ||| || ||| ||
Sbjct 2026061 ACACCGAGACCGACGGGGCGATGGCGCATGTTCGAGTTCTTGGC-CTCCTGAACGGGGTA 2026119
Query 148718 GTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAG 148777
|| |||||| ||||| |||||| || || ||||| || || | | ||
Sbjct 2026120 GTAGTTGCGCGAGATGACGCAGTCAAGGTTCTTGGTAACAACCTTGGTGATCTCGTGAAG 2026179
Query 148778 CAATTCAAAATCGTACTTG------TCA---TCTACGATGCATCGGTTCACGGCGATAGA 148828
| | || || || || ||| || |||| ||| | ||| || ||
Sbjct 2026180 CTTCTTGAAGTCATAGGTGCTGTTCTCAAAGTCCACGAACG--CGGGA-AGGGCAATGGA 2026236
Query 148829 GGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAG 148888
||| || ||||| ||||| ||| || || | |||||| | |||||| | ||| ||
Sbjct 2026237 GGCAAGGTTGCAGACGGCAACCTCGTCGGGAGAAGAGTACTCGATGATCTCAGTGCAGAG 2026296
Query 148889 ATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTT 148948
||| | ||||| ||||| || || || || ||||| |||| || |||||
Sbjct 2026297 GTTGGACGACTTGATAGTGCCCAGGTGCTGCTGGTTAGACTTGCGGTTGGCAGCATCCTT 2026356
Query 148949 GTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATGCAGG 149006
||| || ||| | || || ||||| || ||| | || | ||| || | | ||
Sbjct 2026357 GTAGAGGATGAAGGGGCCACCAGTCTCGGTCTGGGCCTCAAGAATGGCAAACCAG--AGC 2026414
Query 149007 TCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT---CCT---GCTCGTATAAAGTATAC 149060
| ||| || |||| || || | |||||||| ||| ||||||| |||
Sbjct 2026415 TTCTGGGC-----CTTGATGGTCTT-GCGACCCTTGCCCTCACGCTCGTACTTCTGGTAC 2026468
Query 149061 AGCCGCTCGAACGCCTCGCCGTAGCAATCGTCG---AGACCGGGGCACTTGTGCGGGCAC 149117
|| ||| ||| ||| || || | ||||| ||||| ||||||| | ||||||
Sbjct 2026469 AGGGTCTCAAACTTCTC--CG-AGTGAACGTCGGCAAGACCAGGGCACTCGGCGGGGCAC 2026525
Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177
||||| | ||| | ||||| || | || |||||||| || || || || ||||||||
Sbjct 2026526 ATGAGGGTCCAGTCACCGTCGGCCTCGACACGCTTCATGAAGAGGTCAGGGACCCAGAGA 2026585
Query 149178 GCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGC 149237
||||| | || || ||||| || || ||| ||| ||| |||| ||
Sbjct 2026586 GCGTAGAACAGATCACGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCAAGG 2026645
Query 149238 ACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC--- 149294
| | ||| | ||||| ||||| ||||||| ||| | || | || || ||||
Sbjct 2026646 AAGTCGAAAACATCCGCATGCCAGGGCTCAAGGTAGATGGCAAAGGCACCAGGGCGCTTG 2026705
Query 149295 TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATG 149354
||||| |||||||| |||| || | | || | | || | ||| || | ||
Sbjct 2026706 TTGCCACCCTGGTCAACGTAACGGGCGGTCGCGTCGTAGGCACGGAGCATGGGGACGATA 2026765
Query 149355 CCACTGGCAGT-GCCGTTAG-TAGAGCTAATG--CGACTGCCGCGCGCTCGCACTTTGTG 149410
|| ||| ||| ||||| | | ||| |||| ||| ||| || || | |||||
Sbjct 2026766 CCGTTGG-AGTAACCGTTGGTTCCAGC-AATGTACGA--GCCCTTGGCACGAATGTTGTG 2026821
Query 149411 CACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTC 149468
| || || || ||||| || || || ||| ||||| |||| |||| ||| ||
Sbjct 2026822 AATGTGGAGACCAATGCCACCAGCAGT-CTTGGAGATCTGGGCGCAAGTC-TTGAGGGTG 2026879
Query 149469 GAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGC 149528
||||||||| ||||| |||| |||||| | | || ||||| || |||| ||
Sbjct 2026880 TCGTAGATGCCGTCGATCGAGTCGTCCTTCATAGCGACGAGGAAGCATGACGACATCTGA 2026939
Query 149529 GGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTC 149588
|| | || || || ||| | ||| ||| ||||| || || || || | |
Sbjct 2026940 GGGTGGGGAGTACCAGCGTTGAAGAGGGTCGGGGAAGCGTGAGTGAAGTAGCGCTCGGAC 2026999
Query 149589 ATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACG 149648
|| | | ||||| ||| | || ||| |||| || || ||||| || |||| ||
Sbjct 2027000 ATGAGGTTGTACGTCTCAATGACCTTGTCGATGTTGTCACCGTGGATACCGATGGAAACA 2027059
Query 149649 CGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAG---TAG 149705
||||| | ||| |||||||| ||||| ||||| ||| ||| || ||||| ||
Sbjct 2027060 CGCATAATCATGTGCTGCGGACGCTCGGCCACCTTGCCGTCAA---TGCGCAAGAGATAT 2027116
Query 149706 CCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGT 149757
| || || |||||| | || ||||| |||||| | ||||||||| |||
Sbjct 2027117 GAGCGCTCGAGGGTCTTGAAACCGAAGTAGTTGTAGGCGAAGTCGCGGTCGT 2027168
Score = 111 bits (122), Expect = 2e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564
|||||||||||||||||| ||| | || || ||||||||||| || |||||||| |||||
Sbjct 637213 GTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTT 637154
Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624
||| |||||| ||||| | || | |||||| | | ||| || |||| |||||
Sbjct 637153 GTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGGGTGAT 637094
Query 133625 GGTTTTGCCGGTCAGAGTTTTTAC 133648
||| |||||||| || || || ||
Sbjct 637093 GGTCTTGCCGGTGAGGGTCTTAAC 637070
>seq11
Length=562504
Score = 122 bits (134), Expect = 8e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| ||||| ||||| || ||||| ||| | ||| |||||||||||||||||||
Sbjct 29477 GTCGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCC 29418
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | ||||| |||||||||||||| || ||||| |||||||| ||||| |||
Sbjct 29417 GCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTC 29358
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | ||||||| | ||| || || | |||| || ||||| || || ||
Sbjct 29357 ACGTTGTCGATAGTGTCGGACGACTCAACTTCAAGAGTGATAGTCTTGCCAGTGAGGGTC 29298
Query 133644 TTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 29297 TTGACGAAAATCTGCAT 29281
Score = 114 bits (126), Expect = 1e-20
Identities = 143/194 (74%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514
||| | ||| ||||| ||||| || |||||||| | | | | |||| ||||||||||
Sbjct 28519 ATGAAGGGTCGACTCCTTCTGGATGTTGTAATC--CGAGAGGGTACGACCGTCCTCGAGC 28462
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || || | ||||| |||||||||||||| |||||||| |||||||| |||
Sbjct 28461 TGCTTTCCGGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATC 28402
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||||| | || | ||||| | | ||| || || | ||||| ||| |||||
Sbjct 28401 TTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTCTTGCCC 28342
Query 133635 GTCAGAGTTTTTAC 133648
|| ||||| || ||
Sbjct 28341 GTAAGAGTCTTGAC 28328
Score = 114 bits (126), Expect = 1e-20
Identities = 150/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514
||| | ||| ||||| ||||| || ||||| || | || ||| ||||||||||
Sbjct 29028 ATGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGT--ACGGCCGTCCTCGAGC 28971
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| || | ||||| |||||||||||||| ||||| || |||||||| ||||
Sbjct 28970 TGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATC 28911
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||| | | || | ||||| | | || || |||| ||| | ||| |||||
Sbjct 28910 TTGGCCTTCACATTGTCGATGGTGTCCGACGATTCGACTTCGAGGGTAATGGTCTTGCCA 28851
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || ||||| ||||||||
Sbjct 28850 GTGAGAGTCTTGACGAAGATCTGCAT 28825
Score = 114 bits (126), Expect = 1e-20
Identities = 146/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521
|||||||| || || || ||||| || | | | | |||| ||| || ||||||||||
Sbjct 29249 GTGGACTCCTTTTGGATGTTGTAGTC--CGAGAGGGTACGACCGTCTTCAAGCTGCTTGC 29192
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || | ||||| ||||||||||||||||| || || |||||||| ||||| ||
Sbjct 29191 CGGCAAAGATGAGACGCTGCTGGTCGGGAGGAATACCCTCCTTGTCCTGAATCTTCGCCT 29132
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | || | ||||||| | ||| || |||| ||| | ||| ||||| || ||||
Sbjct 29131 TCACGTTGTCGATAGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTGCCTGTGAGAG 29072
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 29071 TCTTGACGAAGATCTGCAT 29053
Score = 113 bits (124), Expect = 4e-20
Identities = 137/185 (74%), Gaps = 4/185 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514
||| | ||| ||||| ||||| || ||||| || | | | | |||| ||||||||||
Sbjct 28800 ATGAAGGGTCGACTCCTTCTGGATGTTGTAGTC--CGAAAGGGTACGACCGTCCTCGAGC 28743
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| || | ||||| |||||||||||||| |||||||| |||||||| ||||
Sbjct 28742 TGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATC 28683
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||||| | || | ||||| | | ||| || || | |||| |||||||||
Sbjct 28682 TTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCAACCTCAAGAGTGATCGTTTTGCCG 28623
Query 133635 GTCAG 133639
|| ||
Sbjct 28622 GTAAG 28618
Score = 111 bits (122), Expect = 2e-19
Identities = 297/446 (67%), Gaps = 15/446 (3%)
Strand=Plus/Minus
Query 120364 ACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAAC 120423
||||| ||| || ||||| | ||||| | || || || | | |||||| |||||
Sbjct 37267 ACGCGCGACTCGAAGAAGTTGGCCTTGCCTTGCAGAGAGATCATCTCCATAAAGTCGAAG 37208
Query 120424 GGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGT-ACGAGCAGTCGGTCCGCTAC 120482
||||| ||| ||| || || | | | |||| | |||||||| ||||| || ||
Sbjct 37207 GGGTTCGTCGAGTTGTAG-ATCTTGTCGTTGCCAAGGGCGACGAGCAGGCGGTCGGCGAC 37149
Query 120483 AAACTCAATGTACTCGCACATG-GACTGCGCGTTCATGCCCAGCAACGCCACCGGCAACG 120541
||||||||||| | ||||||| ||| |||||||| || | | || ||| || | ||
Sbjct 37148 GAACTCAATGTATTGGCACATGAGACCA-GCGTTCATACCGATGAGCGACACGGGGAGCG 37090
Query 120542 CCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGAGCATAGTGT 120601
|| || | ||||||| ||||| | || ||||| || || | | ||
Sbjct 37089 CCTCGGTAAGGAACTCCTGTTCAATCTTGACGGCCTCGCGGATAATCTT---CTCAATGA 37033
Query 120602 GGCCGGGCATCTTGTGTTCGATGC--GCGTTCGGTAGTA--CAGGCACGCAAAGTCCGTG 120657
|| ||| || | ||| | | | | ||| | ||| || |||||||| |||
Sbjct 37032 GGTTGGGG----TGCGGGCGACGGCGGAGATGGGTGAAAAGCAGACAGGCAAAGTCGGTG 36977
Query 120658 TGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCT 120717
|| || |||||||| ||||| || ||||||||| || || ||||||||||||| |||
Sbjct 36976 TGAAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAAGTGAGGCCGGGCATGAGGCCA 36917
Query 120718 TTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATG 120777
| |||||| |||| || | |||||| ||| || || || | || || ||| |
Sbjct 36916 CGCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAAAAGATACCTTCGACGGCG 36857
Query 120778 GCAAAGGCGACCATGCGCTCGGCCAA 120803
|| || || | | |||||| || ||
Sbjct 36856 GCGAACGCAATGAGGCGCTCAGCAAA 36831
>seq2
Length=3730214
Score = 118 bits (130), Expect = 1e-21
Identities = 140/187 (75%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||| ||||| || ||||| || | ||| | | | ||||||||||||||||
Sbjct 3658306 GGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCA-TCCTCGAGCTGCTTGC 3658364
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | ||||| |||||||||||||| |||||||| |||||||| |||||| ||
Sbjct 3658365 CGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCT 3658424
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | ||||||| | |||||| |||| ||||| || ||||| || || |
Sbjct 3658425 TGACGTTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCCGTGAGGG 3658484
Query 133642 TTTTTAC 133648
| || ||
Sbjct 3658485 TCTTGAC 3658491
Score = 82.4 bits (90), Expect = 7e-11
Identities = 104/140 (74%), Gaps = 5/140 (4%)
Strand=Plus/Minus
Query 116472 GCACGGCTTCCACGTGCACGAGTTTGGCGAC---ACCAGCAACGGCTGCACCTCCGCCGG 116528
||||||||||||||| ||||||||||| ||| ||| || ||||||| ||||||
Sbjct 3323991 GCACGGCTTCCACGTCCACGAGTTTGGAGACGTTACCGCTGCCGACTGCACCAGCGCCGG 3323932
Query 116529 CGAACACTTCAACCCCACCGGCCAGGAC-CACGGCGCGCCCAACGCCGCCGTTCGTCACG 116587
| ||||| ||||| | || ||| |||||||||||| | | | || || || |
Sbjct 3323931 CCCGCACTTTAACCCGTTC-AACATGACGCACGGCGCGCCCGAGGACAAGGTCCGCCATG 3323873
Query 116588 TCGGTGACCTGGGCAACATT 116607
|||| ||||| |||||||||
Sbjct 3323872 TCGGCGACCTCGGCAACATT 3323853
>seq3
Length=3725192
Score = 87.8 bits (96), Expect = 2e-12
Identities = 110/151 (73%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699
|||||||||||||| ||||| || ||||| || || || || ||||| || || ||
Sbjct 3008276 AGGCACGCAAAGTCGGTGTGAAGACCCTCATCTCGAGAGATGAGCTCATTCGAGAATGTA 3008217
Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759
||||| |||||| || | | |||| |||| ||||| ||||| ||||| |||
Sbjct 3008216 AGGCCACGCATGAGACCGCGCTTTTTGAGCCAGAAGATGGCAGCAAATGATCCCGAGAAG 3008157
Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCA 120790
|| | ||||||||| |||||||||| ||
Sbjct 3008156 AAGATGCCCTCCACACATGCAAAGGCGATCA 3008126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420630802720
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