Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20domesticum_20[genbank_20GCA_5F001599015.1_202016-03- 01] 28 sequences; 24,510,922 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3 109 8e-19 >seq3 Length=3725192 Score = 109 bits (120), Expect = 8e-19 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||| || ||||| || || |||||||||| | || | || || || ||||| || Sbjct 3008274 GCACGCAAAGTCGGTGTGAAGACCCTCATCTCGAGAGATGAGCTCATTCGAGAATGTAAG 3008215 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 ||| |||| ||||| |||||||||||||| || ||||||||||| ||||| || ||||| Sbjct 3008214 GCCACGCATGAGACCGCGCTTTTTGAGCCAGAAGATGGCAGCAAATGATCCCGAGAAGAA 3008155 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCT 39768 |||||| || || |||||| || | ||||| Sbjct 3008154 GATGCCCTCCACACATGCAAAGGCGATCAGTCT 3008122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908559581920