Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20domesticum_20[genbank_20GCA_5F001599015.1_202016-03- 01] 28 sequences; 24,510,922 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 9e-12 >seq3 Length=3725192 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 46645 TGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCA 46704 ||||| || ||||||| | || | || || || ||||| || ||| |||| || || Sbjct 3008258 TGAAGACCCTCATCTCGAGAGATGAGCTCATTCGAGAATGTAAGGCCACGCATGAGACCG 3008199 Query 46705 CGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCC 46764 |||||||||||||| || || || || || ||||| || ||||| ||||| || ||| Sbjct 3008198 CGCTTTTTGAGCCAGAAGATGGCAGCAAATGATCCCGAGAAGAAGATGCCCTCCACACAT 3008139 Query 46765 GCGAATGCGACAAGTCT 46781 || || |||| ||||| Sbjct 3008138 GCAAAGGCGATCAGTCT 3008122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934150472960