Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 2e-12 >seq3 Length=3502833 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020 ||||| || || ||| |||| |||||||| | ||| || ||||| || || || Sbjct 1065045 AGACAGGCAAAGTCGGTATGTGTGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTG 1064986 Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080 | || |||| ||| || ||||| ||||| || || || |||||||| ||||||||| Sbjct 1064985 AGGCCACGCATGAGTCCGCGCTTCTTCAACCAGAAGATGGCAGCGAACGAGCCAGAAAAG 1064926 Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGT 17116 || || |||||||| | || ||||| || || ||| Sbjct 1064925 AAGATCCCCTCGACACAAGCGAACGCTATCAACCGT 1064890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545412389720