Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq8 87.8 1e-12 >seq8 Length=1129179 Score = 87.8 bits (96), Expect = 1e-12 Identities = 127/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 33541 GTCAAGATCAAGCTGCGCAAGATACGCATACCAGAGATGGGCGACAAGTTTGCATCG-TT 33599 ||||||||| | ||| || || || || |||| || ||||||||||| ||| Sbjct 474444 GTCAAGATCCGCATCCGCTCGACGCGTATCCCGCAGATTGGAGACAAGTTTGCGTCGCGC 474503 Query 33600 CACGGCCCAGAAGGGCACGTGCGGCATGATGTACGACCAGTGGGACATGCCGTTCACGGC 33659 ||||| |||||||| ||| ||| || | ||| || |||||||||||||||||| Sbjct 474504 CACGG-TCAGAAGGGTACGATCGGTATCACCTACCGGCAAGAGGACATGCCGTTCACGGC 474562 Query 33660 CGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGAC 33716 || ||| | || || ||| | || |||||||| || || | || ||||| ||||| Sbjct 474563 TGAGGGCATTGTGCCCGACATTGTTATCAACCCTCACGCCATTCCGTCGCGTATGAC 474619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233474093687