Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 5e-13 >seq6 Length=2185627 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| ||| || || || || |||||||| ||| || || | || ||||| || Sbjct 20665 TGAAGTGTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGACCATCCTCGAGCTGC 20606 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || |||||| ||||||| || ||||| || ||||| ||||| || ||||| ||| || Sbjct 20605 TTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTC 20546 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || | | || | |||||| | | || || || | ||| | |||||||||||| Sbjct 20545 GACTTGACATTGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTCTTGCCGGTG 20486 Query 143162 AATGTTTTTACGAATATTTGCATA 143185 | || || ||||| || |||||| Sbjct 20485 AGGGTCTTGACGAAGATCTGCATA 20462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507014216207280