Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 4e-15 >seq6 Length=2185627 Score = 96.9 bits (106), Expect = 4e-15 Identities = 111/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 15050 CCCGAGATTGGCGACAAGTTTTGCTC-TGGTATGGCGCAAAAGGGCACGTGCGGCATGAT 15108 |||||| | ||||||||||||| ||| | | ||| |||||||| ||||||| | || Sbjct 1746715 CCCGAGCTGGGCGACAAGTTTTCCTCGCGCCACGGC-CAAAAGGGTGTGTGCGGCCTCAT 1746773 Query 15109 TTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAA 15168 |||| |||| ||||||||| || | || |||||| | || ||||||||||| || Sbjct 1746774 CGTCCCTCAGGCAGACATGCCGTTCAACGACCAAGGCATCAGCCCAGACATTATCATGAA 1746833 Query 15169 CCCCAACTGCATCCCGTCCCGCATGAC 15195 ||| || | ||||||| |||||||| Sbjct 1746834 CCCTCACGGTTTCCCGTCGCGCATGAC 1746860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611391778370400