Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq4 168 1e-36 seq2 167 4e-36 seq6 165 2e-35 seq5 118 2e-21 seq3 118 2e-21 seq8 105 1e-17 >seq4 Length=3284570 Score = 168 bits (186), Expect = 1e-36 Identities = 676/1043 (65%), Gaps = 45/1043 (4%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || ||||| | ||||||| | ||| ||| ||| ||||| | || || ||||||||| Sbjct 2356382 TAACGCCAGAGCATGTACTCGAGGGGAGTCGAGTCAAGGTGCTGGTCGATGTGGTGGAAA 2356441 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCC-CCGAG- 225095 || |||||||| ||||| | ||| | ||| || |||||||| || | || ||||| Sbjct 2356442 GCGTGCTGGGCAACGTAACCAATGACGAGGTTAGGGTGCTTCCAGACGGTACCGCCGAGG 2356501 Query 225096 -TCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGG 225154 | || | | ||||||||| |||| ||||| ||| || | |||||||| ||| ||||| Sbjct 2356502 TTGGGCTCGGTCTCGCCGGTAAGGAGCTTGACGAGAGTCGACTTGCCCGAACCGTTGGGA 2356561 Query 225155 CCAATCACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCT-- 225212 |||| ||| | | || || || | | ||||| ||| | || | || || Sbjct 2356562 CCAAGGACGGCGACACGCGACGAGAGCGAGACCTGGAGGTTGATGTCCCAGAGCTGCTGG 2356621 Query 225213 -CAGGGCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTG 225271 | ||| || |||| ||||| ||| || ||| | || | |||||| Sbjct 2356622 ACGGGGGCACCGGGGTACTGGAAGGCAACGTTCTTCATCTTGAGGAGCGACTTCTCCTTG 2356681 Query 225272 GAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC--CT 225329 | | | ||| || |||| ||| | ||||| ||||| || || | | Sbjct 2356682 GTCTTGACACCGTCGAGGAGAGGGGGGTTGGGGAGGGTGAACTTGTAGTCCTCGGCAACG 2356741 Query 225330 TC-AGGTCGTAGTAAGATGCAG-CCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCC 225387 || || | | || ||| || | ||||||| | | || || || ||||| || Sbjct 2356742 TCGAGCTGGAAG-AAGGCGCGGGCCTCGGGGACCATGTTGACAAAGGCCTCGAGGTTACC 2356800 Query 225388 GAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCG-T 225446 | ||| | ||||||||| ||| || || | || | || | |||| | Sbjct 2356801 GGGGTAACGCTTGAGCTTGAAGTTGTTGAGGTGGAGGAC----GTCGGTGATGGTGCGGT 2356856 Query 225447 CAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGT 225506 ||||||| | |||||||| ||||| ||||| || | || || || | | |||| Sbjct 2356857 TAAGGAAGTCCGAGTCGTGCGACACCATGATCGAAGTGCAGTGGGTGAGCGACGTAAGGT 2356916 Query 225507 GCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCA 225566 ||||||||| | |||||| |||||| | |||||| || || ||||| || || | Sbjct 2356917 AGTCGATGAGCCAGGTGACGTTGACGACGTCGAGGTGGTTAGTGGGCTCGTCGAGGAGGA 2356976 Query 225567 GGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGG 225626 | ||||| || | | |||||||| || | || | |||||||| ||||| || || | Sbjct 2356977 GAATGTCGGCCTTGAACAGGATGGCACGGGCAAGGGCGAGCTTCATCTTCCAACCACCCG 2357036 Query 225627 ACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTCG--TCAAAGCCGT---ACTCCAGGAG 225681 | || || ||||| || ||||| ||||| || |||||| |||| ||| Sbjct 2357037 AGAGCGAACCGATCGAGTGCTGCTGCTT--CTTCGAGTCGAAGCCGACCGACTCAAGG-- 2357092 Query 225682 CGTCTGGATAATGCGCTCGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAGAGGT- 225740 ||| |||||| |||||| | | || || | ||| | | || ||||||| Sbjct 2357093 -GTCGAGATAATCTCCTCGGGGGTG--GCAAGGAG--ACGCTTG--TC---CGAGAGGAC 2357142 Query 225741 --AATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGT 225798 | || | || || | | || ||||||||||||| | ||||| | || Sbjct 2357143 CCAGTCGACAATGGAGATCGACTCCTCCGAGCCGTCAATGTCGTGCTGGACGTAGAAGGT 2357202 Query 225799 CCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAG 225858 |||| ||| || | |||||||||||||| | |||| || |||| || | || Sbjct 2357203 GCGGACCTGCGAGGGGTCGGGGAAGCCCTCAACCTGGTTGTTGACAATGGCGTTCATGAG 2357262 Query 225859 GGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTT 225918 ||| |||||||| ||||| |||| | ||| ||||| | | || ||||||| Sbjct 2357263 GGTCGACTTGCCCGAACCGTTACGACCAAGGAGACCGTAGCGGTGGCCACGCTTGAGACG 2357322 Query 225919 GAGG--CGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACT-CGCAA-- 225973 |||| ||||| || || || |||||| |||| ||||||||| ||||| | ||| Sbjct 2357323 GAGGTTGGCGTG--GTGGAGAAGAATCTTGGCACCGTAGGCAAGGTTGAACTGCTCAATG 2357380 Query 225974 TCGCACAGGTCCTCACCCTCCTC 225996 | ||| ||||||||||||||||| Sbjct 2357381 TTGCAGAGGTCCTCACCCTCCTC 2357403 Score = 91.5 bits (100), Expect = 3e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 224498 AGCGCGCCAAGCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGG 224557 ||||| | |||||||||||||| ||| |||| || ||||| |||||| ||| |||||| Sbjct 2355887 AGCGCAGCGAGCGACTCGCGGTCGAGGTAGTTGGTGGGCTCGTCCAGGCAGATGACGTGG 2355946 Query 224558 GGGCACTGCCACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCG 224617 || | |||| ||| ||||||| || | ||| |||||||| || || ||||| || Sbjct 2355947 GGACGGCGCCAAGTGGCGGCACCAAGGACGACCTTGACCTTCTGGCCACCCGAGAGACCA 2356006 Query 224618 CGGAT 224622 || || Sbjct 2356007 CGCAT 2356011 >seq2 Length=3675159 Score = 167 bits (184), Expect = 4e-36 Identities = 683/1060 (64%), Gaps = 25/1060 (2%) Strand=Plus/Plus Query 175974 CCCTTGAACCCCCGATACCAAGGGGTCATTGGGAGCATCGTCTCGTTGTTAATGAGGCGC 176033 ||||| || || || ||||||| || | || | | | |||| | |||||||| Sbjct 3084908 CCCTTAAATCCACGGAACCAAGGAGTGAGCGGAACCTGCTCCTCGCCGCGCATGAGGCGA 3084967 Query 176034 TTCACATTGTCTACGATATCCTTGGGGTTGTAAGCCGGAATGTTAGTGCTAAATCCTGTT 176093 | || || || || ||| ||||||||| || || ||||| |||| ||| Sbjct 3084968 CGGAGGTTCTCGACAATCTCCACGGGGTTGTAGTTGGGGATCGACGTGCTCCATCCAGTT 3085027 Query 176094 CCTATTCCTGACGATCCATTCACCAGGAGAAACGGGATGGTGGGAACATAGTATTCCGGT 176153 || || || ||| || ||||| || | | || | |||||| | ||||| || || Sbjct 3085028 CCGATACCGTCCGAACCGTTCACGAGAACCATGGGAACGGTGGGGAGGTAGTACTCGGGC 3085087 Query 176154 TCAATCCGGTCGCCGTCATCCTCGAGGTAGTTCAGCAGACGCTCGTCGGCCTTGTGGAAA 176213 || || || | ||| ||||| | |||| ||| || || | ||||| |||||| Sbjct 3085088 TCGATGCGCTGGCCATCATCGACCAGGTGGTTGAGGAGCTCGTTGTCGGAAGGGTGGAAG 3085147 Query 176214 ATATCCCGGGTGTTG--GGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTCCT 176271 || | || | ||||| |||| ||||| || || | || ||| |||| Sbjct 3085148 ATGGTGTGAGTCATCTTGGGGAT-GTTG-GTGAAAATGTAACGAGGGCTGGCAGCATCCT 3085205 Query 176272 TGCCTCCGTGAAGGCGGGAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATTCG 176331 |||| || || | || | |||||| || ||| || || | |||||||| || Sbjct 3085206 TGCCACCCTGGATACGCGTACCGAACTGACCGTTGGGCGAGAGGAGGTTGATGTTGTTGC 3085265 Query 176332 AACCCACGTAGTCTTGGGCCATTCCGACTATGGCGCCCTG--GAGAGACGCCTCGCCGTG 176389 |||||||||| ||| || | ||||| |||| | || ||| ||||| || ||||| Sbjct 3085266 TGCCCACGTAGTTTTGAGCGAGACCGACAATGGT--CATGACGAGGGACGCTTCACCGTG 3085323 Query 176390 GTGATAGCCGGCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTCTTGTAC 176449 ||| ||| | | ||||||| || || | | ||| ||||| ||||| || || Sbjct 3085324 GTGGTAGGCAGTGTTCTCAGAGACATAACCACCGAGCTGGGCGACCTTGATCTCCTGCTT 3085383 Query 176450 GAGGTTGCGCTTCAACGCCGAGAACAGAATCTTCCGCTGCGAGGGCTTCAGACCATCGAC 176509 |||||||||||| || || |||| | ||| ||||| |||||| || || || | Sbjct 3085384 GAGGTTGCGCTTGAAGCACGCAAACATCACCTTGCGCTGACCGGGCTTGAGGCCGTCCGC 3085443 Query 176510 GACCGACGGAATGGAACGCTCTACATCGTATCTTGAAAAAAGGATAAGGTCTTTGTTTAT 176569 |||||| ||||||||||| ||| | || || |||||||| || ||||| | Sbjct 3085444 GACCGAGGGAATGGAACGGATGTTGTCGGCCATGGAGAACAGGATAAGCTCCTTGTTGAC 3085503 Query 176570 GAAATCCTCCACTGGAATCTTCGTGAGCTTCTGGTCGAGCTGGTTGCCAGGCTCGAAATC 176629 || |||| | || |||||| | | |||||||| | | || |||| ||| | Sbjct 3085504 AAAGTCCTGGATGGGGATCTTCTCAATATCGTGGTCGAGGAAGGTACCGGGCTTGAACTG 3085563 Query 176630 AAGGAGCCACGTCTTCCGTTCGTCCGCCCGAGACTTGTTGAAAGACTTGTCAAT----GC 176685 | |||||| ||| || ||||| ||| ||||||||| | | ||||||| || Sbjct 3085564 GCGAAGCCACTCCTTGCGGTCGTCGGCCTTCTTCTTGTTGAACGCCATGTCAATGAGCGC 3085623 Query 176686 TTTCGGCCGCGTTG-TCA-GACCACGTAAGCGTCTTCACCAGGGC--CTTCAGGTTGTTG 176741 || | || ||| | ||| ||| || | || | | || ||| || | | | Sbjct 3085624 CTT-GTCCTCGTCGTTCATGACATCGAACGC----AAGACGGTGCTTCTTGAGATCGGTA 3085678 Query 176742 AAGTACCGCTTGGCGTCATTGGCGTCGGAGGTACCCAGACCCTTGTAATACTTAGTCTTC 176801 ||||| || ||||| ||| | | |||||| ||||||||||| ||||| | | || Sbjct 3085679 AAGTAGCGAACAGCGTCCGCGGCCTTGCTGGTACCGAGACCCTTGTAGTACTTGGACGTC 3085738 Query 176802 CAGGTAGAGACATCGGATGTCGCGGCCTTCCACTCTTCGAAATCCGGGATGCTGTAGAAC 176861 ||| | | | || || |||||||||| ||| | | || ||| |||||||| Sbjct 3085739 CAGCCACGGCCGTCCTTGTTCTGCTCCTTCCACTCCTCGTACTGAGGCATGGTGTAGAAC 3085798 Query 176862 TCCACCATCTTGGTGCCCTTCTTGGCGACCACAATTGGAGTCACGAAGCGCT-TGAGGAA 176920 || | || |||||||| || | ||||| ||||| | || | || ||||| Sbjct 3085799 ACCTGCTCCTGCTTGCCCTTCGTGACCTTGACAATGGGAGTGA-TAAACTCTACAAGGAA 3085857 Query 176921 CCCGGGGATCTCGAGCAGCGACGGG-AACTGTGCATGGAAAAAGTTCAGCACTAGACCAG 176979 ||||||| ||| ||||||||| || ||| | || ||||| | | ||||| Sbjct 3085858 GTCGGGGATGCGGAGAAGCGACGGGTAAAAGTG-GTCGAGGAAGTTGATGATGAGACCCT 3085916 Query 176980 CAATATGTGAGCCGTCAACGTCCTGGTCTGCCATAATAAT 177019 ||||| || ||||| ||||| || | ||| || || Sbjct 3085917 TGATATGCGAACCGTCGTGATCCTGATCGGTCATGATCAT 3085956 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || || ||||| || |||||||| || || ||| Sbjct 2842967 CCACCACGGAGACGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 2843026 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| |||||||| || || | || ||||| || || Sbjct 2843027 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGGGGG 2843086 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 2843087 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 2843146 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || | ||||||||| || ||||||||| Sbjct 2843147 TCAAGGGTGATGGTCTTGCCCGTGAGG 2843173 Score = 105 bits (116), Expect = 1e-17 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 || || || || || | || || || | |||||| |||||||| ||||| | || ||| Sbjct 1356129 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGG 1356188 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 || || || ||||| |||||||| || ||||| | ||||||| ||||||||||| | Sbjct 1356189 TCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAG 1356248 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || || || || | ||||||||| || ||||| ||| Sbjct 1356249 GACTCCACCTCGAGGGTGATGGTCTTGCCCGTAAGG 1356284 >seq6 Length=2185627 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| ||||| ||||||| || | ||| || |||||||| || |||||||| || || | Sbjct 20235 TTCCACCGCGGAGGCGCAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCG 20176 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 |||| || | || || || | |||||| |||||||| ||||| | || |||||||||| Sbjct 20175 AGAGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGTG 20116 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | ||||| |||||||| || ||||| | ||||||| ||||||||||| | || || | Sbjct 20115 GGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCGA 20056 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 | || | ||||||||| ||||| || ||| Sbjct 20055 CCTCGAGGGTGATGGTCTTTCCGGTCAGG 20027 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || || | || | ||| || || ||||| || |||||||| || ||||| Sbjct 20689 CCCCCGCGGAGACGGAGGACGAGGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAC 20630 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || ||||| || ||| Sbjct 20629 AGCGTACGACCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGA 20570 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| | |||||| ||||| ||||| | || || || Sbjct 20569 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATCGTGTCGGACGACTCGACC 20510 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || ||||||||||||||||| |||||||| Sbjct 20509 TCGAGAGTGATCGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 20463 Score = 131 bits (144), Expect = 3e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || |||||||| || || ||||| || || || Sbjct 20461 CCACCACGCAGACGGAGGACGAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCCGAC 20402 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| ||||| || || || | || ||||||||||| Sbjct 20401 AGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCGGGTGGG 20342 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| |||||||| ||| || ||||||||||| ||| || || || Sbjct 20341 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATGGTGTC-GCTAGACTCGAC 20283 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | || || || ||||| ||||||||||| || || ||||||||| Sbjct 20282 CTCGAGAGTAATCGTCTTTCCGGTGAGGGTCTTCACAAAGATCTGCATT 20234 Score = 123 bits (136), Expect = 5e-23 Identities = 121/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 || |||||||| || | || || || | |||||| |||||||| ||||| | || ||| Sbjct 19843 TAGTCGGAGAGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGG 19784 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 ||||| || ||||| |||||||| || ||||| | ||||||| ||||||||||||| Sbjct 19783 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGAC 19724 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || || || || | ||||||||| || || |||||| Sbjct 19723 GACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGG 19688 Score = 116 bits (128), Expect = 7e-21 Identities = 312/470 (66%), Gaps = 8/470 (2%) Strand=Plus/Minus Query 9937 TGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGA 9996 |||| |||| ||| ||| |||| || || |||||||||||| | |||||||| || Sbjct 95111 TGACACCCGACTTGGAGTAGGCCGAGACGCGCGACTCGAAGAAGTTTGCCTTGCCCTGGA 95052 Query 9997 GGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGA 10056 | || || | |||||| ||||| || ||||| | | | | |||| || |||| Sbjct 95051 GCGAGATCATCTCCATAAAGTCGAATGGGTTTGCAGAGTTGTAAATCTTGTCGTTGCCGA 94992 Query 10057 GTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCA 10116 | || || | |||||| || || ||||| |||||||||| ||| || | | ||||| Sbjct 94991 GCGCGACGAGCAGGCGGTCGGCGACAAACTCAATGTACTGGCACATGAGCGCGGCGTTCA 94932 Query 10117 TGCCAATCATGCG-GCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCT 10175 |||| || | ||| | ||||| |||||| | ||| || | ||| | || || || Sbjct 94931 TGCCGATGA-GCGAGACGGGGAGGGCGTCTGTGAGGAACTCTTGCTCGATCGCAACGGCC 94873 Query 10176 TCCTCGACGATGCTCTTTACCACGTCAAGG-GACAGCTTGTTCTCGAGCTTCGAATACAG 10234 || || ||| | || | ||| || || || | ||| | | | || Sbjct 94872 TCGCGGATGATCATGTTGATGGTGTCTGGGTGAGGGC-GGCGGCGGAGGTGGGTGAAGAG 94814 Query 10235 GAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACC 10294 || |||| | |||||| ||||||||||| ||||| ||||||||| || Sbjct 94813 CAGGCAGGCAAAGTCGGTGTGGAGACCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGT 94754 Query 10295 CAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAA 10354 |||||||||||||| || || || |||||||| |||| | ||||| || |||| Sbjct 94753 GAGACCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGA- 94695 Query 10355 CAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGA 10402 |||||| ||||| ||| | |||||| || ||||| || || || Sbjct 94694 -AGAAGATGCCCTCGACGGCGGCAAAGGCGATAAGACGCTCGGCAAACGA 94646 >seq5 Length=2501492 Score = 118 bits (130), Expect = 2e-21 Identities = 1078/1728 (62%), Gaps = 45/1728 (3%) Strand=Plus/Plus Query 30920 CTGTGTCTGGTCAACAAACGGACCGCGGTCTGCTGCAAGGTCAATGACGGTCTTCATAGA 30979 ||| | |||||| | |||| || ||||| || |||||||||||||| | |||| || Sbjct 907986 CTGCGACTGGTCGATGAACGCGCCACGGTCGGCCGCAAGGTCAATGACAGCCTTCTGCGA 908045 Query 30980 CAGCTCCCATGCGGTCTTGTAGATTGCCTTGAGCTCA---GGGTGGATGCCAATGACACG 31036 || |||||| | |||||||| ||||||||||||||| || | || |||| | Sbjct 908046 CACCTCCCAAACAGTCTTGTAAATTGCCTTGAGCTCATCTGGAATGTTGGGAATG---TG 908102 Query 31037 TTGGATGGACCCCCCGTTGGCAATAATCTGGTTCTTCATGGCCTCGGACCACGTGCCACG 31096 ||||| || || ||| |||||| || ||||||||||| ||||| ||| |||| | Sbjct 908103 CTGGATCGAGCCACCGGAGGCAATGATGAGGTTCTTCATGTCCTCGTCCCAGATGCCCAG 908162 Query 31097 AGCGATGAGGTCGCGCACGAGGTAGTTGTTGACCACAGGGAACTCTCCAGCAAGGGTCCG 31156 ||||||||| || | ||| || | ||| || |||| || || | || || Sbjct 908163 GTTGATGAGGTCACGGAGGAGCCAGGGGCAGACGACCTGGAAGTCACCCGAGAGCACACG 908222 Query 31157 GCGGCTGTACAGATTAGAAGTGATCGGCTCCATAGC-CTCTACGGACCCGCAGATTTGCG 31215 ||| ||| || | || ||| ||||| | ||| ||| | || ||| |||| Sbjct 908223 GCGAGCGTAGAGCATCGAGGTGTAGGGCTCGA-AGCACTCGTTCCAGCCAAGGATCTGCG 908281 Query 31216 CGGTGGATGCGGTGGGCATCAGCGCGGTGGTCAGCGAATTCCTGACACCCTTCTTGACGC 31275 ||| || || |||||||| ||||| ||||| || | |||||| | | ||| || Sbjct 908282 AGGTCGAGGCAGTGGGCATGGGCGCGACAAGGAGCGAGTTGCGGACACCGTGC-TGA-GC 908339 Query 31276 GCTCTT--CGAGGGTCT---TCCAGTC---AAGGCGAGTTACCGGCTCGGTTCCCCAGAG 31327 | | || || || || ||||||| ||| || ||| | |||||||| Sbjct 908340 GATGTTGGCGCGGAGCTCGGTCCAGTCCCAGAGGTCGGT---GGGCACACGGCCCCAGAG 908396 Query 31328 GTGATACTGCATCACACCACGAGACGCGGGAGACCCCTCAAAGGTAGGATGGGGACCGTG 31387 || || | | ||| | || || || ||||| |||| || | || Sbjct 908397 GTCGGGTTGGAGCTTACCCTGCGAGATAGGCGAGCCCTCGTAGGTGGGGTACTTGCCAAA 908456 Query 31388 CTCTTCCGCGAGTTCGCAAGAGGCCTCCACCGCTGCAAAGTAAATATTCTCAAAGATTTC 31447 ||| | || | ||||| || | ||| | || || ||| || |||||||||| | Sbjct 908457 CTCCTGGGCCATCTCGCACGACGACTCGAGGGCAGCGTGGTAGATGGTCTCAAAGATCTT 908516 Query 31448 CCGGTTGAGGTTCTTGGCCGCGTCAGAGTCAAAAGGCATGCGCAGCTTGAAGAACACGTC 31507 |||| || | ||| || ||||| || |||||||| || | ||| ||| Sbjct 908517 GAGGTTAAGCTCACGGGCGGCAGGCGAGTCGAAGGGCATGCGGAGAGCCATGAAGGTGTC 908576 Query 31508 CTGAAGACCCTGGACACCCACTCCAATTGGGCGCCGGCGCATGTTACTAGTCTTCGCCTC 31567 |||||| || || || | || | ||||| |||||||||| || | ||||| Sbjct 908577 GGCAAGACCTTGCACGCCGAGACCGACGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTC 908636 Query 31568 GGGAATTGCGTAGGACATGACGTCAATGCTCTTGTCGAGGTTCTTGGCCAGAATCTTCAC 31627 | | |||| | | | ||| || |||||||||||||| || || ||| Sbjct 908637 CTCGACGGGGTAGTAGTTCTTGGTGATGACCTGGTCGAGGTTCTTGGTCACAACCTTGGT 908696 Query 31628 GTGCTTGCGAAGGTCCTCAAAGTCGTA-----GGCAC-CGTTCTTGACGTAGTTCTGGAG 31681 | || | | || | || ||||||||| ||| | | | | ||| | |||| Sbjct 908697 GATCTCGTGCAGCTTCTTAAAGTCGTACGACTGGCTCTCAATGTCGACAAACGCAGGGAG 908756 Query 31682 GACGATGCTTCCAATGACACACACCGCCGTTTCGTCCGTAGAAGTGTATTCGACAATCTC 31741 | | || | | | || || || ||||| | | | ||| |||| ||||| Sbjct 908757 GGCAATCGAGGCCAGGTTGCAGACGGCGACCTCGTCGGGGGCCGAGTACTCGATGATCTC 908816 Query 31742 GGCACAAAGATTGCTGCCCGTGATGGTGCCGGCATTGGACTGCATGTTCTTCACGTTCAC 31801 | || || ||| | ||||||||||| | ||| || ||| ||| | Sbjct 908817 AGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCTGTTGGC 908876 Query 31802 GCTGTCCTTGTTGAGCACGTAAGGCATGCCCGTCTCGATCTGCGTGATGATCATCGCATT 31861 |||||||| ||||| | | || || |||||| |||| | || || ||| Sbjct 908877 AGCGTCCTTGTAGAGCATGAAGGGACCACCAGTCTCGGTCTGGGCCTCGAGGATGGCAAA 908936 Query 31862 CCAGACATCGCGCGCTTTGA-CGACTTTCTTCGCACGCCCCTCGGACTCGTAGCGAAGAT 31920 ||||| | | || |||| | ||| | | | | || | | |||||||| | Sbjct 908937 CCAGAGCTTCTGGGCCTTGATGGTCTTGCGACCCTTG-CCGGCAGCCTCGTAGCTCTCGT 908995 Query 31921 ACAGGTCCTCGTACTCCTTGCCAAAGG-CATCGGTTAGACCGGGACACTCCTTGGGGTCG 31979 | || | ||| ||||| | | | || | |||| |||||||| ||||| ||| Sbjct 908996 AGAGCTTCTCAAACTCC-TCCGAGTGGACGTCGGCGAGACCGGGGCACTCGGCAGGGCAC 909054 Query 31980 AAGAGCGACCATGCGACATCGGCCTCTACTCGCTTCATGAACAGGTCGTTCAGCCACATC 32039 | ||| | ||| || | |||||||| || ||||||||||| |||||| | ||| | Sbjct 909055 ATGAGGGTCCAGTCGCCGTCGGCCTCGACACGCTTCATGAAAAGGTCGGGGATCCAGAGA 909114 Query 32040 GCGTAAAACAGATTCCTGGCGCGTTGGGTCTCCTCACCCTGGTTACGTCGGAGCAGCAGG 32099 ||||| || || | | ||||| ||||| || ||||| ||||| ||| Sbjct 909115 GCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGG 909174 Query 32100 AAGTCCATGATGTCGGGGTGGTGGGGCTCGAGGTACACGGCGAAAGATCCCTTGCG---G 32156 ||||| | | ||||| ||| ||||||||||| | |||||| | || ||| | Sbjct 909175 AAGTCGAACACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCGAACGCACCAGGGCGCTTG 909234 Query 32157 CGACCCCCCTGGTTTGCGTATGCAGATGTCGTGTCGTACACCTTCAGCATGGGTACGATG 32216 || ||||||| |||| | || | |||||| | |||||||| ||||| Sbjct 909235 TTGCCTCCCTGGTCGACGTAACGGGCAGTGGCGTCGTAGGCGCGGAGCATGGGGACGATA 909294 Query 32217 CCATCAGACTCGCCATTGGTCCCCTGGATCTTGGAACCACGGCCGCGAATGTCGCTCAGG 32276 || | || | ||| ||||| || || | || || | ||||||||| | | | Sbjct 909295 CCGTTCGAGTAGCCGTTGGTACCGGCAATGTACGAGCCCTTGGCGCGAATGTTGTGGATG 909354 Query 32277 TGCAGGCCGATGCCGCCACCAAACTTGGAAAGCTGTGC-AACGTCACCAAGAGACTTGAA 32335 || || ||||| || ||| || |||||| | ||| || | ||| || | | | | Sbjct 909355 TGGAGACCGATACCACCAGCAGTCTTGGAGATCTGAGCGCAGGTC-TTGAGGGTGTCGTA 909413 Query 32336 GATGTTGGTGAGCGAGTCATC---CACGTGGACAAGGAAACAGCTTGCAAGATTGGCATT 32392 |||| | | |||||| || || | ||| || || || | | | || | Sbjct 909414 GATGCCGTCAATCGAGTCGTCCTTCATGGCGACGAGAAAGCACGACGACATCTGGGGGTG 909473 Query 32393 TCTGAACCCTGCATTGAACAGGGTCGGGCTCGCATGCGTGAACTTGCGCTTGGA-AAGAG 32451 | || || ||||| ||||| || ||| || ||||| | |||| || | ||| Sbjct 909474 GGGGGTACCGGCGTTGAAGAGGGTTGGCGACGCGTGGGTGAAGTAACGCTCCGACATGAG 909533 Query 32452 CATCGTAGGTTTCCTTCACCTTCGCGATGTCTTCTCCCCAGAGAGCGATCGCCACGCGCA 32511 | ||| || || ||||||| | |||| || || || | | || || || |||| Sbjct 909534 -GTTGTACGTGTCGAGCACCTTCTCAATGTTGTCGCCGTGGATACCAATAGCGACACGCA 909592 Query 32512 AATACGTGTGCTGGGGGCGCTCTACGACCTTGCCATCCA--CCTTGGTCAGGTAGAGGCG 32569 | |||||||||| ||||| |||||||||| | | | || ||||| ||| Sbjct 909593 TGATCATGTGCTGGGGACGCTCGGCGACCTTGCCGTTGATGCGCAGG--AGGTACGAGCG 909650 Query 32570 CTTCATGGTTGAGAAGCCAAAGTAGTCAAAGTCATAGTCGCGGTCGTA 32617 || | ||| |||||||||||||| | | ||||||||||||| Sbjct 909651 CTCGAGGGTCTTGAAGCCAAAGTAGTTGTACGAAAAGTCGCGGTCGTA 909698 >seq3 Length=3502833 Score = 118 bits (130), Expect = 2e-21 Identities = 429/662 (65%), Gaps = 12/662 (2%) Strand=Plus/Minus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || ||||||||||||||||| || ||| |||| ||||| | || |||||||| Sbjct 2444798 TAACGCCACTGGATGTACTGCACGGCAGTCTTGTCGAGGTGCAGGTTGATGTGGTGGAAC 2444739 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCC-CGAGT 225096 ||||| || || ||||| | | || | ||| ||||| ||| |||||| | | Sbjct 2444738 GCATGTTGAGCGACGTAGCCGACACGGAGCGCGGGGTGCTTGTGCACCGAGCCCTCCTGG 2444679 Query 225097 CGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCC 225156 | || | |||||| ||||||| ||||||||| ||| |||| || ||||| ||||| || Sbjct 2444678 GGAATG-GTCTCGCCAGTGAGGAGCTTGATGAGGGTACTCTTACCGGCACCGTTGGGACC 2444620 Query 225157 AATCACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTT---GCTGAAGATCTC 225213 || | || | || || |||| | || | || ||||||| | || | || Sbjct 2444619 AACGATACCGACACGCGACGACAGCGAAAGCGAGCAGGTCACGTTCGAGATGGACGGCTT 2444560 Query 225214 AGGGCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTGGA 225273 | | || | |||| | |||| || ||||| | ||||||||| ||||| Sbjct 2444559 GGCGGCACCTGGGTAGGTGAAGGTGGCGTTGGAGAGCTTGAGAATGGCACGGGTGTTGGA 2444500 Query 225274 AGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTCAG 225333 | ||| | || | ||||| ||||| ||||| || | | | || Sbjct 2444499 GCGCACACCGACAAGCGAACCGGGAGGAGGGAAGGTGAACTTGATCGAGGTGGCGGCGAG 2444440 Query 225334 GTCGTAGTAAGATGCAGCCTC-GGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGAGGT 225392 | |||||| || ||||| ||| ||| | | || || |||||||| || || Sbjct 2444439 GGTGTAGTACGACTTGGCCTCGGGGACGCGCT-CGACAAACTTGGACAGGTTGCCCTTGT 2444381 Query 225393 GCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAAGGA 225452 | |||||| || ||||||| || | ||| ||| ||| || |||||||| Sbjct 2444380 AGTAGACGAGCTT---CTTGCTCTCGTAGTGGATAATGTCCGTGCAGACGTTGTCAAGGA 2444324 Query 225453 AGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAGGTGCGTGA 225512 ||||||||||||| || || || | | | | || | | ||| |||||| || Sbjct 2444323 AGCCAGAGTCGTGCGAGACGATCAGGCAGGTCATCTGAGGAAGGTTGGTGAGGT-AGTCC 2444265 Query 225513 T-GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATG 225571 | |||||| || ||| | |||||| | |||||| || || || || || || || ||| Sbjct 2444264 TCGAGCCACGCGACGGTCTGGACGTCTAAGTGGTTAGTCGGCTCATCGAGGAGGAGAATG 2444205 Query 225572 TCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGG 225631 || ||| | || || || || |||| ||| |||||||| ||||| || || || || Sbjct 2444204 TCGGCACCGATAAGCATCGCACGCGCGAGCTCGAGCTTCATCTTCCAACCACCCGAGAGC 2444145 Query 225632 GA 225633 || Sbjct 2444144 GA 2444143 >seq8 Length=1129179 Score = 105 bits (116), Expect = 1e-17 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 || || || || || | || || || | |||||| |||||||| ||||| | || ||| Sbjct 496525 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGG 496466 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 || || || ||||| |||||||| || ||||| | ||||||| ||||||||||| | Sbjct 496465 TCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAG 496406 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || || || || | ||||||||| || ||||| ||| Sbjct 496405 GACTCCACCTCGAGGGTGATGGTCTTGCCCGTAAGG 496370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622065911880