Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq5 235 7e-56 seq6 196 6e-44 seq3 185 1e-40 seq7 181 1e-39 seq4 100 3e-15 >seq5 Length=2501492 Score = 235 bits (260), Expect = 7e-56 Identities = 348/492 (71%), Gaps = 21/492 (4%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||||||||| || || ||| ||| || ||||||||||||| |||| ||||| || Sbjct 909243 CTGGTCGACGTAACGGGCAGTGGCGTCGTAGGCGCGGAGCATGGGGACGATACCGTTCGA 909302 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | ||||||||| || || | ||| | ||| |||||| | ||||| | | || Sbjct 909303 GTAGCCGTTGGTACCGGCAATGTACGAGCCCTTGGCGCGAATGTTGTGGATGTGGAGACC 909362 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || || || | ||||||||| | ||||| ||||| |||||||||||||| || Sbjct 909363 GATACCACCAGCAGTCTTGGAGATCTGAGCGCAGGTCTTGAGGGTGTCGTAGATGCCGTC 909422 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||||||||| |||||||| | ||||||||||||||||| | || ||||| | || || Sbjct 909423 AATCGAGTCGTCCTTCATGGCGACGAGAAAGCACGACGACATCTGGGGGTGGGGGGTACC 909482 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||||||||| || |||| ||| |||||| | || ||||||| || ||| || Sbjct 909483 GGCGTTGAAGAGGGTTGGCGACGCGTGGGTGAAGTAACGCTCCGACATGAGGTTGTACGT 909542 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | ||||||| | || || | || | | || | | || || ||||| Sbjct 909543 GTCGAGCAC-----------CTTC-TCAATGTTGTC---GCCGTGGATACCAATAGCGAC 909587 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAGGA 1630484 ||||||| ||||| |||||| |||||| |||| |||| | || |||| | | Sbjct 909588 ACGCATGATCATGTGCTGGGGACGCTCGGCGACCTTGCCGTTGA---TGCGCAGGAGGTA 909644 Query 1630485 CCGGCGC---ATGGTCATGAGGCCAAAGTAGGAAAAGGCAAAATCGCGGTCGTGGCGGAT 1630541 | |||| | |||| ||| |||||||||| | | ||| |||||||||| | ||| Sbjct 909645 CGAGCGCTCGAGGGTCTTGAAGCCAAAGTAGTTGTACGAAAAGTCGCGGTCGTAGATGAT 909704 Query 1630542 GGCGGCGTCGAG 1630553 ||| | |||||| Sbjct 909705 GGCCGAGTCGAG 909716 Score = 152 bits (168), Expect = 6e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 1254351 AGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTG 1254410 || || ||| | | ||| ||||| ||||| |||||||||||||||| ||| || | Sbjct 1320173 AGCTCACCGGGGAGGATGAGGCGGACGGCAGTCTGGATCTCGCGCGACGAGATGGTCGAG 1320114 Query 1254411 CGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTG 1254470 || | ||| | ||| || |||||||||| ||||||| |||| |||||| Sbjct 1320113 CGGTGGTTGTACGACGCGAGCTTCGAGGCCTCGGTGGCGATGCGCTCGAAAATGTCGGCA 1320054 Query 1254471 ACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGC 1254530 ||||||||||| | || | ||| | |||||||||||| || ||||||||| |||||| Sbjct 1320053 ACAAACGAGTTGAGGATGGCCATGGCCTTGTTGGAGATACCAGTGTCGGGGTGGACCTGC 1319994 Query 1254531 TTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 ||||| |||||||||||| ||||||||||||| Sbjct 1319993 TTGAGGACCTTGTAGATGTACGACGAGTACGA 1319962 Score = 141 bits (156), Expect = 1e-27 Identities = 331/505 (66%), Gaps = 6/505 (1%) Strand=Plus/Plus Query 1628099 CGACAAACTTGGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTCCGTGGGCGACG 1628158 |||||||| || ||||| | || |||||||| || || || ||| | || Sbjct 908741 CGACAAACGCAGGGAGGGCAATCGAGGCCAGGTTGCAGACGGCGACCTCGTCGGGGGCCG 908800 Query 1628159 AAAACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGT 1628218 | ||| || |||||| ||||| ||||||| |||| | | || || |||| |||||||| Sbjct 908801 AGTACTCGATGATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGT 908860 Query 1628219 TGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCG 1628278 ||| | |||| | |||||||||| ||||||| |||| | || |||||| |||| | Sbjct 908861 TGGACTTGCTGTTGGCAGCGTCCTTGTAGAGCATGAAGGGACCACCAGTCTCGGTCTGGG 908920 Query 1628279 CCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCGCGCG--GCCCT 1628335 || ||| |||||| |||||| || | || | || ||| ||| | ||| Sbjct 908921 CCTCGAGGATGGCAAACCAGAGCTTCTGGGC---CTTGATGGTCTTGCGACCCTTGCCGG 908977 Query 1628336 NNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGG 1628395 ||||| || | || | ||| || |||| Sbjct 908978 CAGCCTCGTAGCTCTCGTAGAGCTTCTCAAACTCCTCCGAGTGGACGTCGGCGAGACCGG 909037 Query 1628396 GCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGA 1628455 | ||||| || || | ||| | ||||||||| ||| | | | || ||| || | Sbjct 909038 GGCACTCGGCAGGGCACATGAGGGTCCAGTCGCCGTCGGCCTCGACACGCTTCATGAAAA 909097 Query 1628456 GGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGT 1628515 |||| |||| || ||||| |||||||| || || || ||||||||||||||||| Sbjct 909098 GGTCGGGGATCCAGAGAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTGCCGTGGT 909157 Query 1628516 TCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAA 1628575 |||| ||||||||| |||||| | |||||||||||| ||||| |||||| ||| | Sbjct 909158 TCTTGCGGAGGTCGAGGAAGTCGAACACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCGA 909217 Query 1628576 AGGCGCCCTTGCGCTTGCCGCCGCC 1628600 | || || ||||||| ||| || Sbjct 909218 ACGCACCAGGGCGCTTGTTGCCTCC 909242 Score = 132 bits (146), Expect = 6e-25 Identities = 361/544 (66%), Gaps = 18/544 (3%) Strand=Plus/Plus Query 1626984 GTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCGGT 1627043 ||||| ||| ||||||||||||| ||| || || | ||| || || |||||| ||| || Sbjct 907845 GTCGATGGTGAACTGGATGGCGTTGGCAGCCGGGCGGGTACGGAGGTAGTACTGGCCAGT 907904 Query 1627044 CTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCGTC 1627103 |||||| ||||| ||| ||||| ||||||||| |||| || | || | || Sbjct 907905 CTTGAGTCCGCGCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGCGAGAACGAAGGGTT 907964 Query 1627104 GGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGCCAT 1627163 | || | |||||||||||| |||||||| | | | || |||||||| | Sbjct 907965 CGACAGGTGGATGTTGAGCGACTGCGACTGGTCGATGAACGCGCCACGGTCGGCCGCAAG 908024 Query 1627164 GTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGTCGGG 1627223 ||| ||| || | | ||||||||| || |||||| | || |||||||| || Sbjct 908025 GTCAATGACAGCCTTCTGCGACACCTCCCAAACAGTCTTGTAAATTGCCTTGAGCTCATC 908084 Query 1627224 CGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGAGCCTGTCGCG 1627283 || | || | || | ||| | |||||| | || | || || Sbjct 908085 TGGAAT------GTTGGGAATGTGCTGGATCGAGCCACCGGAGGCAATGATGAGGTTCTT 908138 Query 1627284 AAAGTCGGGCGTCC-ACAGGCCGCGCGCCATCAGG---CGCTTGA-CCAGGTGGCGGTTG 1627338 | ||| ||||| | | ||| | || ||| || || ||||| ||| | | Sbjct 908139 CATGTCCT-CGTCCCAGATGCCCAGGTTGATGAGGTCACGGAGGAGCCAGG-GGCAGACG 908196 Query 1627339 ACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCG 1627398 ||| | ||||| ||||||||||| ||||| | ||||| | |||| | |||| Sbjct 908197 ACCTGG---AAGTCACCCGAGAGCACACGGCGAGCGTAGAGCATCGAGGTGTAGGGCTCG 908253 Query 1627399 CACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGG 1627458 | |||| | ||| ||||||||||| |||| ||| ||||||||| |||| || ||| Sbjct 908254 AAGCACTCGTTCCAGCCAAGGATCTGCGAGGTCGAGGCAGTGGGCATGGGCGCGACAAGG 908313 Query 1627459 AGCGAGTTGCGCAGGCCGTGCTG-TCGAACTAGCGCGCGCAGCGCGTCCCAGTCCCAGCG 1627517 ||||||||||| | |||||||| ||| | | ||||| ||| || |||||||||| | Sbjct 908314 AGCGAGTTGCGGACACCGTGCTGAGCGATGTTG-GCGCGGAGCTCGGTCCAGTCCCAGAG 908372 Query 1627518 GCCG 1627521 | || Sbjct 908373 GTCG 908376 Score = 131 bits (144), Expect = 2e-24 Identities = 305/447 (68%), Gaps = 31/447 (7%) Strand=Plus/Plus Query 96654 GCCGAGAACCTCATGATCGTCGACCTGGTGCGCAACGACCTGAGCGTGTGCTGCGCGCCC 96713 |||||||||||||||||||||||||| | ||| ||||||| | |||||||| ||| Sbjct 674020 GCCGAGAACCTCATGATCGTCGACCTAATCCGCTCCGACCTGCTCTCGTGCTGCGT-CCC 674078 Query 96714 GGCAGCGTCGTCGTGCCGCCCGGCCGC--CTGATGGCGATTGAGACCTACGCCGCCGTGC 96771 | | | |||| || | |||| || || || | ||| | |||| || ||| Sbjct 674079 GTCCAC-----CGTGACGGTC--CCGCAACTCATCGCCCTCGAGTCGTACGGCG---TGC 674128 Query 96772 ACCAGATGGTGACCACCGTCGACGGCCTGCTCGACCGCGGCCGGACGGCGC--TCGACCT 96829 || | | || |||||||| | |||| ||| | ||| | |||||| |||| Sbjct 674129 ACAACCTCGTCACCACCGTGGTGGGCCAGCTGG--CGCCACACATCGGCGCCGTCGAGAG 674186 Query 96830 CGTGC-GCGCGGCCTTTCCGCCGGGCTCGATGACGGGCGCGCCCAAGGCGCGCAGCATGG 96888 ||| |||| || || || |||||||| |||||||||||||||||| |||| | || Sbjct 674187 CGTCAAGCGCTGC-TTCCCCCCGGGCTCCATGACGGGCGCGCCCAAGCTGCGCTCCGTGC 674245 Query 96889 AGATTCTCGATCGCCTCGAGAAGCACCGCCCGCGCGGGATCTACTCGGGCGCGCTGGGCt 96948 || | || || | ||||| ||||| ||||||||| |||||||| |||||||| || | Sbjct 674246 AGCTCCTGGACGGGTTCGAGGCGCACCACCCGCGCGGCATCTACTCTGGCGCGCTCGGGT 674305 Query 96949 ttttttCGGCCGACGGCGCCTGCAGCCTGTCGGTGGTGATCCGCACGGCCGTCATCGA-C 97007 |||||| | |||| | | | || || |||||||||||| || |||| Sbjct 674306 ACTTTTCGCTCTGCGGCAGCGCCGACTTGAGTGTCGTGATCCGCACGATGGTGCTCGAGG 674365 Query 97008 GCGGACGGCTCGGCGTCGGTGGGCTGCGGCGGCGCCAT--CGTCGCCGACTCGGACCCCG 97065 ||| | ||| || | || | | ||||| || || ||| || | ||||| | || Sbjct 674366 GCGAGCAGCTGAGCATTGGCGCG----GGCGGGGCGATTACGTGGCTG--TCGGAGCGCG 674419 Query 97066 ACGCCGAGTTTGCCGAGATTGTGCTCA 97092 | | ||||| |||||| ||||||| Sbjct 674420 AGGGCGAGTGGGCCGAG---GTGCTCA 674443 >seq6 Length=2185627 Score = 196 bits (216), Expect = 6e-44 Identities = 227/302 (75%), Gaps = 3/302 (1%) Strand=Plus/Minus Query 868709 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 868768 |||||| |||||| ||||| | |||||||| ||||||||||| |||||| | ||| Sbjct 95085 ACGCGCGACTCGAAGAAGTTTGCCTTGCCCTGGAGCGAGATCATCTCCATAAAGTCGAAT 95026 Query 868769 GGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACA 868828 ||||| | | ||||| ||| ||| ||||||| |||||||||||||||||||| Sbjct 95025 GGGTTTGCAGAGTTGTAAATCTTGTCGTTGCCGAGCGCGACGAGCAGGCGGTCGGCGACA 94966 Query 868829 AACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGAC 868888 ||||| ||||||||||||||||| ||||||||||||||||||||| || || || | Sbjct 94965 AACTCAATGTACTGGCACATGAGCGCGGCGTTCATGCCGATGAGCGAGACGGGGAGGGCG 94906 Query 868889 TCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCTGGGCACGTC- 868947 || | | ||||||| ||||||| | ||||||||| ||||||| || ||| Sbjct 94905 TCTGTGAGGAACTCTTGCTCGATCGCAACGGCCTCGCGGATGATCATGTTGATGGTGTCT 94846 Query 868948 GGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAGTGCA-ACC 869006 || |||||| | | ||| ||| |||||||||||||||||||| ||| | ||| Sbjct 94845 GGGTGAGGGC-GGCGGCGGAGGTGGGTGAAGAGCAGGCAGGCAAAGTCGGTGTGGAGACC 94787 Query 869007 CT 869008 || Sbjct 94786 CT 94785 Score = 154 bits (170), Expect = 2e-31 Identities = 153/196 (78%), Gaps = 9/196 (5%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| |||||||| ||| | |||||| |||| ||| ||||||||||| |||||||| Sbjct 94789 ACCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCGCGCTT 94730 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | || ||||||||| ||||||||||||||||||||||| Sbjct 94729 CTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCAAA 94670 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355 | |||| || ||||||||||| | |||| | ||||| ||||| || | ||| Sbjct 94669 GGCGATAAGACGCTCGGCAAA--CGACGAG----TTCTTGTCAGAAATCCAGTTGAGCGC 94616 Query 869356 CCAGTCGGCCTTTTTC 869371 |||||||||||| ||| Sbjct 94615 CCAGTCGGCCTTCTTC 94600 >seq3 Length=3502833 Score = 185 bits (204), Expect = 1e-40 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18256 CAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAAC 18315 ||||||||||| ||| ||||| |||| |||||| | ||| |||||||| | || |||| Sbjct 2106714 CAGTCGGGCACCGAGCACGGCGTCACCCTCGGCACCCCCATCGGCCTCATGGTCCACAAC 2106655 Query 18316 CGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCCCTCACACGCC 18375 |||||||| || |||||| |||| | | | | | ||||| ||||| |||||| Sbjct 2106654 AAGGACCAGCGCCCTCACGACTACACCGAGACGGACCTGTTCCCGCGTCCCTCGCACGCC 2106595 Query 18376 GACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCT 18435 |||||||||||| |||||||||||||||||||||||||||| ||||| ||||| | || Sbjct 2106594 GACTACACCTACCTGGCCAAGTACGGCATCAAGGCGTCGTCTGGCGGCGGCCGCGCTTCG 2106535 Query 18436 GCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 ||||| |||||| | || ||||| |||||||| | || ||||| Sbjct 2106534 GCCCGTGAGACCATTGGCCGTGTCGCTGCCGGCGCCATTGCGGAGAA 2106488 Score = 138 bits (152), Expect = 1e-26 Identities = 205/289 (71%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 507584 CAGATCGGGTGGTCGGTCGAGCGCCACCTGCGCGCGGGCGACGCCGTGGTGATGAACCGG 507643 ||| | |||||| || ||||| ||||| | |||||| ||| || | ||||| Sbjct 404756 CAGTTTGGGTGGATTGTGGAGCGTCACCTCAAGGACGGCGACTACGTTCTGTTCAACCGT 404697 Query 507644 CAGCCGTCGCTGCACATGGGCTCCATGCTCATGCACAAGGTGGTGCCCATGCCCGGGCGC 507703 |||||||||||||||| | |||||| | | ||| || | |||| | | Sbjct 404696 CAGCCGTCGCTGCACAAGATGTCCATGATGAGTCACCGCGTCAAGGTCATGAACTACTCC 404637 Query 507704 ACCATGCGATTCAACCTGGCCGTCACGGGCACCTACAACGCCGACTTTGACGGCGACGAG 507763 ||| | || |||||||| | ||||| | |||||||||||||| || || |||||| Sbjct 404636 ACCTTCCGTCTCAACCTGTCTGTCACCTCGCCTTACAACGCCGACTTCGATGGAGACGAG 404577 Query 507764 ATGAACCTGCACGTGCCCCAGTCCGAGACGGCGCGCGCCGAGGTGACGCACA--CCATGA 507821 |||||| |||||||||| ||||||||| | | || |||||| ||| || | ||| Sbjct 404576 ATGAACTTGCACGTGCCTCAGTCCGAGGAGACACGTGCCGAGCTGAGCCAGATTGCAT-- 404519 Query 507822 GCGTGTCGCTCAAGACCGTGTCGCCGCAGGCCAACAAGCCCATCATCGG 507870 | || ||| | ||| | | ||||||||||||||||||||| |||| || Sbjct 404518 GGGTCCCGCGCCAGATCATCTCGCCGCAGGCCAACAAGCCCGTCATGGG 404470 Score = 132 bits (146), Expect = 6e-25 Identities = 110/132 (83%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 19054 TCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCA-GGCCTCGGCGAGCCGTGC 19112 |||||||||| | || |||||| |||||| |||| | ||||| |||||||||||| Sbjct 2106254 TCGGCGGCACCATCACCTGCGTGATCCGCAAC-TGCCCCCTCGGCCTGGGCGAGCCGTGC 2106196 Query 19113 TTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGA 19172 ||||||||| ||||||||| ||||| ||||||||||| ||||||||| |||||||||| Sbjct 2106195 TTTGACAAGCTCGAGGCCGTCCTCGCGCACGCCATGCTCTCGATCCCGTCCACCAAGGGC 2106136 Query 19173 TTCGAGATTGGC 19184 || ||||| ||| Sbjct 2106135 TTTGAGATCGGC 2106124 Score = 87.8 bits (96), Expect = 2e-11 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 19615 GCAGCAGACGTGCGAATACGGCGGCGAGCAGGCCACGTTGGAGGCGCGCGGGAGGCACGA 19674 |||||||||| | | |||| ||||||| | |||| | | | | ||||| | ||||| Sbjct 2105929 GCAGCAGACGGCCAAGTACGACGGCGAGGCCGGCACGCTCGCGACTCGCGGCCGCCACGA 2105870 Query 19675 CCCGTGCGTCGTCGCGCGCGCGGTCCCCATCGTCGAGGCCATGGCGGCCATGGTCCTC 19732 |||||| || || | ||||| |||||||||| ||| ||||||| ||||| |||||| Sbjct 2105869 CCCGTGTGTGCTCCCCCGCGCCATCCCCATCGTGGAGACCATGGCCGCCATTGTCCTC 2105812 >seq7 Length=1238362 Score = 181 bits (200), Expect = 1e-39 Identities = 283/402 (70%), Gaps = 2/402 (0%) Strand=Plus/Plus Query 1573902 CCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGCC 1573961 ||||| | |||||||| || ||| || || |||| | |||| ||||| | ||| Sbjct 465927 CCCGGTATCGGCAAGACGACCTCAATCCACTGCCTCGCGCACGCCCTCCTGGGCCCAGCC 465986 Query 1573962 GCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCGC 1574021 | ||| | ||| ||||| |||||||| || |||||||||||| ||||||| |||||| Sbjct 465987 TACCGCGAAGGCGTCCTCGAGCTCAACGCCTCCGACGAGCGCGGCATCGACGTGGTGCGC 466046 Query 1574022 AAGATCATCAAGCACCACGC-CTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGT 1574080 || | |||||| | || | | ||| || ||| || ||||| || |||||| | Sbjct 466047 AACAAGATCAAGTCCTTTGCGCAGCGCAAGG-TCACCCTCCCACCCGGGCGGCACAAGAT 466105 Query 1574081 GATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCAGCAGGCCCTGCGGTCCAC 1574140 ||||||||||||||||||||| | || ||| ||||||||||| ||||| ||| Sbjct 466106 CGTCATCCTCGACGAGGCCGACTCGATGACCGCGGGCGCCCAGCAGGCGCTGCGCCGCAC 466165 Query 1574141 CATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGGT 1574200 ||||||| ||| ||||||||||||||| || || |||||||||| | | | | Sbjct 466166 GATGGAAATCTACAGCAACACGACGCGCTTCGCGCTCGCGTGCAACATGAGCAACAAGAT 466225 Query 1574201 CATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTTTGTGCGCCTGGGTGACGCCCA 1574260 ||||||| | |||| ||||| ||||| ||||| | | ||| | |||||| | Sbjct 466226 CATCGAGCCGATCCAGTCGCGCTGTGCCATCCTGCGGTACTCGAAGCTGCGCGACGCCGA 466285 Query 1574261 GATACGCGCGCGCCTATGCGATATTGTCGCCGCCGAAAAGGT 1574302 | | | ||| || || ||| ||||||||| ||||| Sbjct 466286 GGTGCTGAAGCGTCTCGAGGAGATTTGCGCCGCCGAGAAGGT 466327 >seq4 Length=3284570 Score = 100 bits (110), Expect = 3e-15 Identities = 235/348 (68%), Gaps = 10/348 (3%) Strand=Plus/Minus Query 92604 GCGATCTGGCGCGTGAGGGCCTCCTGCACCTGGAAGCGGTCGGAAAACATGTCGACGATG 92663 |||| |||||| || || |||||| ||||||| ||| | |||| | || |||| Sbjct 2948335 GCGACCTGGCGGGTAAGACGCTCCTGGACCTGGAGACGGCGCGCAAACGTCTCTGCGATA 2948276 Query 92664 CGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGT-GGGCAGGTAGCCCACGTGGGCCTT 92722 |||| | |||||| ||||| | | | ||| || ||| | |||||| | | | ||| Sbjct 2948275 CGCGCCAGCTTGCTGAGGCCAAGCA-CGTGCTTGTTGGGGATGTAGCCGATGGAGATCTT 2948217 Query 92723 GCCCATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCGACGTCGCGCACGAT 92782 |||| | || |||| || |||||||| |||| ||| ||| ||| | |||||| ||||| Sbjct 2948216 GCCCGTGAACGGCACGAGGTGGTGCTCACACAGCGAGTAAATGTCAATGTCGCGGACGAT 2948157 Query 92783 CACCATCTCGCCCGAGGCCTCGGCAAAGAGCGCGTCGCCGATGGCCTCGGCCAGCGTCAT 92842 ||||||||| | | ||||| |||| | || ||| ||| | ||||||| | Sbjct 2948156 GACCATCTCGTCGTGGTCCTCGTCAAACACGGCATCGTTGATCACGGTCGCCAGCGGCTC 2948097 Query 92843 GCGGTGGCCGCGCGTGCGC-TCCACCATG---GCCTTGGCCACGCGCATCGGCGTGTCCA 92898 || ||| | || | ||||| ||| |||||||| |||| || ||| | Sbjct 2948096 CTCGTAGCC---CTTGGTCATCCAC-ATGAGCGCCTTGGCGTAGCGCTCGGGAGTGCGCT 2948041 Query 92899 GGAGGCCCTCGCGCCGCACGTCCTCGCCCAGGCAGGCCAGCAGCGTCC 92946 | ||||||||||| ||||||||| | ||| | |||| |||| Sbjct 2948040 GCAGGCCCTCGCGGTCTGGGTCCTCGCCGATGCACTCGAGCACTGTCC 2947993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107136820124193