Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq6 197 2e-44 seq5 197 2e-44 seq7 167 4e-35 seq3 131 3e-24 seq1 111 2e-18 seq4 86.0 1e-10 >seq6 Length=2185627 Score = 197 bits (218), Expect = 2e-44 Identities = 242/327 (74%), Gaps = 4/327 (1%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| |||| ||||| || | |||||| |||||| ||||| | |||||||| || Sbjct 95111 TGACACCCGACTTGGAGTAGGCCGAGACGCGCGACTCGAAGAAGTTTGCCTTGCCCTGGA 95052 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||||||| |||||| | ||| ||||| || | ||| ||| ||| |||| Sbjct 95051 GCGAGATCATCTCCATAAAGTCGAATGGGTTTGCAGAGTTGTAAATCTTGTCGTTGCCGA 94992 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 ||| | ||||||||||||||||| || |||||||||||||||||||| |||||||||| Sbjct 94991 GCGCGACGAGCAGGCGGTCGGCGACAAACTCAATGTACTGGCACATGAGCGCGGCGTTCA 94932 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||||||||||| ||||| || | || ||| ||||||| ||||||| | ||||||| Sbjct 94931 TGCCGATGAGCGAGACGGGGAGGGCGTCTGTGAGGAACTCTTGCTCGATCGCAACGGCCT 94872 Query 794131 CGATGATGATCTGCCTGGGCACGTC-GGACGACGGCTTGTCGAC-GAGCATCGTGTAGAG 794188 || ||||||| || ||| || || ||| | || | ||| ||| |||| Sbjct 94871 CGCGGATGATCATGTTGATGGTGTCTGGGTGAGGGC--GGCGGCGGAGGTGGGTGAAGAG 94814 Query 794189 CAGGCAGGCAAAGTCGCAATGCAGACC 794215 |||||||||||||||| || ||||| Sbjct 94813 CAGGCAGGCAAAGTCGGTGTGGAGACC 94787 Score = 170 bits (188), Expect = 3e-36 Identities = 238/326 (73%), Gaps = 7/326 (2%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| |||||||| ||| | |||||| ||| ||| ||||||||||| |||||||| Sbjct 94789 ACCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCGCGCTT 94730 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACT-GCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 794458 ||||||||| ||||||| | |||| ||||||||| |||||||||||||||||||||| Sbjct 94729 CTTGAGCCAGAAGATGG-AGGCAAACGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCAA 94671 Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCC 794518 || ||| || ||||||||||| | | || | | | | ||||| || | ||||| Sbjct 94670 AGGCGATAAGACGCTCGGCAAA--CGACGAGTTCTTGTCAG-AAATCCAGTTGAGCGCCC 94614 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGT-CCTTC 794577 | || ||||| ||| | | |||| | | || || ||| || |||| || | | Sbjct 94613 AGTCGGCCTTCTTCTTGATGCAGGGAATGTTCTCAATCGCGTTGAACAGGTAGTGGCGGC 94554 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 || | ||| | ||| |||||||||||||||||||| ||||| ||||| ||||| Sbjct 94553 GCG-CATTGTCGCGAATGTACGTGTCGATGAGGAGCGAGTACGTCTCCGAGTGAATGTTC 94495 Query 794638 TCGATGGCGATCTGGAAGCCATAAAA 794663 || || |||||||||||| || || Sbjct 94494 TCCATCATGATCTGGAAGCCGTAGAA 94469 >seq5 Length=2501492 Score = 197 bits (218), Expect = 2e-44 Identities = 350/508 (69%), Gaps = 27/508 (5%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||| || || || ||| ||| || ||||||||||||| || | ||||| || Sbjct 909243 CTGGTCGACGTAACGGGCAGTGGCGTCGTAGGCGCGGAGCATGGGGACGATACCGTTCGA 909302 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | ||||||||| || || | ||| | |||| |||||| | ||||| | | || Sbjct 909303 GTAGCCGTTGGTACCGGCAATGTACGAGCCCTTGGCGCGAATGTTGTGGATGTGGAGACC 909362 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || || || | ||||||||| | ||||| | || || || ||||||||||| || Sbjct 909363 GATACCACCAGCAGTCTTGGAGATCTGAGCGCAGGTCTTGAGGGTGTCGTAGATGCCGTC 909422 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||||||||| |||||||| | | |||||||||||||| | || ||| | | || || Sbjct 909423 AATCGAGTCGTCCTTCATGGCGACGAGAAAGCACGACGACATCTGGGGGTGGGGGGTACC 909482 Query 2073780 GGCATTGAAGAGCGTGGGCGTCGCCGCCGTGTACGACTGTTGGGACATGGCCTCGTAGGT 2073839 ||| |||||||| || |||| ||| ||| | | | | |||||| | ||| || Sbjct 909483 GGCGTTGAAGAGGGTTGGCGACGCGTGGGTGAAGTAACGCTCCGACATGAGGTTGTACGT 909542 Query 2073840 GGCGAGCACGCGCGCCAGCGCGTCTTGGACGTCGGCAAACCCATAGTGGCCGATGGCGAC 2073899 | ||||||| | | | | || |||| || | | || || ||||| Sbjct 909543 GTCGAGCACCTTCTCAA-----TGTT----GTCG------CCGTGGATACCAATAGCGAC 909587 Query 2073900 GCGCATGATCATGTACTGGGGTCGCTCGACGAC---GGCGT---CGCGCACCTTGGTCAG 2073953 ||||||||||||| |||||| |||||| |||| | ||| ||||| || || Sbjct 909588 ACGCATGATCATGTGCTGGGGACGCTCGGCGACCTTGCCGTTGATGCGCA----GG--AG 909641 Query 2073954 GTAGGACCGACGCAGGGTCGCCAGGCCAAAGTACGAGTAGGCCAGGTCGCGCTCGTGGCG 2074013 ||| || || |||||| | ||||||||| ||| | | |||||| |||| | Sbjct 909642 GTACGAGCGCTCGAGGGTCTTGAAGCCAAAGTAGTTGTACGAAAAGTCGCGGTCGTAGAT 909701 Query 2074014 GATGGCGGCGTCGAGGGCCTCCTTGTGC 2074041 |||||| | |||||| ||||||||||| Sbjct 909702 GATGGCCGAGTCGAGCACCTCCTTGTGC 909729 Score = 181 bits (200), Expect = 2e-39 Identities = 197/259 (76%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| ||||||||||| ||||| |||| ||||||| | | || || ||| | | Sbjct 1320219 GTACTTGGTCACGGCCTTGGTGCCCTCCGAGATGGCGTGCTTCGAGAGCTCACCGGGGAG 1320160 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| ||||| ||||| |||||||||||||| | ||| || ||| | ||| || || Sbjct 1320159 GATGAGGCGGACGGCAGTCTGGATCTCGCGCGACGAGATGGTCGAGCGGTGGTT-GTACG 1320101 Query 1485591 -CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||| || |||||||||| ||||||| |||| |||||| ||||||||||| | Sbjct 1320100 ACGCGAGCTTCGAGGCCTCGGTGGCGATGCGCTCGAAAATGTCGGCAACAAACGAGTTGA 1320041 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 ||| | ||| | ||||||||||| || ||||||||| ||||||||||| ||||||| Sbjct 1320040 GGATGGCCATGGCCTTGTTGGAGATACCAGTGTCGGGGTGGACCTGCTTGAGGACCTTGT 1319981 Query 1485710 AAACAAAGGACGAGTACGA 1485728 | | | ||||||||||| Sbjct 1319980 AGATGTACGACGAGTACGA 1319962 Score = 140 bits (154), Expect = 5e-27 Identities = 296/446 (66%), Gaps = 14/446 (3%) Strand=Plus/Plus Query 2071574 ACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGTGGTGCCCAGGTTCTGCTGGTTGC 2071633 ||| || || ||| ||||| ||||||| |||| | ||||||| |||| |||||||||| Sbjct 908804 ACTCGATGATCTCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTGG 908863 Query 2071634 TGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGCGCACCCGTCTCGATCTGCGCCG 2071693 | |||| | |||||||||| |||||| |||| |||| |||||| |||| ||| Sbjct 908864 ACTTGCTGTTGGCAGCGTCCTTGTAGAGCATGAAGGGACCACCAGTCTCGGTCTGGGCCT 908923 Query 2071694 TGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGA-GGTCCTCGCGCGGCCCTNNNNN 2071752 || |||||| |||| | || |||| || |||| | ||| |||| Sbjct 908924 CGAGGATGGCAAACCAGA----GCTTCTGGGCCTTGATGGTCTT---GCGACCCTTGCCG 908976 Query 2071753 NNNNNNNNNNNNN------AGAGGGCGTCAAAGGCGGCGCCGTGGCACTCGTGCAGGCCG 2071806 |||| ||||| | | |||| ||| || ||| Sbjct 908977 GCAGCCTCGTAGCTCTCGTAGAGCTTCTCAAACTCCTCCGAGTGGACGTCGGCGAGACCG 909036 Query 2071807 GGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAAC 2071866 || ||||| ||||| | ||| | |||||||||| | | | | || || ||| || Sbjct 909037 GGGCACTCGGCAGGGCACATGAGGGTCCAGTCGCCGTCGGCCTCGACACGCTTCATGAAA 909096 Query 2071867 AGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGG 2071926 |||||| |||| || |||| ||||| || || || || |||||||||||||||| Sbjct 909097 AGGTCGGGGATCCAGAGAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTGCCGTGG 909156 Query 2071927 TTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCA 2071986 ||||| |||||||| |||||| | |||||||||||| ||||| |||||| ||| Sbjct 909157 TTCTTGCGGAGGTCGAGGAAGTCGAACACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCG 909216 Query 2071987 AAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 || || || ||||||| ||| || Sbjct 909217 AACGCACCAGGGCGCTTGTTGCCTCC 909242 Score = 120 bits (132), Expect = 5e-21 Identities = 213/306 (70%), Gaps = 15/306 (5%) Strand=Plus/Plus Query 122738 GCCGAGAACCTCATGATCGTCGACCTGGTGCGCAACGACCTGAGCGTGTGCTGCGCGCCC 122797 |||||||||||||||||||||||||| | ||| ||||||| | |||||||| || Sbjct 674020 GCCGAGAACCTCATGATCGTCGACCTAATCCGCTCCGACCTGCTCTCGTGCTGCGTCCCG 674079 Query 122798 GGCAGCGTCGTCGTACCGCCAGGTCGCCTCATGGCGATCGAGACCTATGCCGCCGTGCAC 122857 || ||| || |||| | ||||| || ||||| | || || ||||||| Sbjct 674080 TCCACCGTGACGGTCCCGCAA------CTCATCGCCCTCGAGTCGTA---CGGCGTGCAC 674130 Query 122858 CAGATGGTGACCACCGTCGACGCCCTGTTGGATCGGCACAGGACGGCGC--TGGACCTCG 122915 | | || |||||||| | | || | ||| || |||| |||||| | || || Sbjct 674131 AACCTCGTCACCACCGTGGTGGGCCAGCTGG--CGCCACACATCGGCGCCGTCGAGAGCG 674188 Query 122916 TGCGTGCG-GCCTTTCCGCCGGGCTCGATGACGGGTGCGCCCAAAGCGCGCAGCATGGAC 122974 | | ||| ||| || |||||||| |||||||| |||||||| |||| | || | Sbjct 674189 T-CAAGCGCTGCTTCCCCCCGGGCTCCATGACGGGCGCGCCCAAGCTGCGCTCCGTGCAG 674247 Query 122975 ATTTTGGATCGCCTCGAAGAGCACCGTCCGCGCGGAATCTATTCGGGCGCACTCGGGTTC 123034 | |||| | |||| | ||||| |||||||| ||||| || ||||| ||||||| | Sbjct 674248 CTCCTGGACGGGTTCGAGGCGCACCACCCGCGCGGCATCTACTCTGGCGCGCTCGGGTAC 674307 Query 123035 TTTTCG 123040 |||||| Sbjct 674308 TTTTCG 674313 Score = 120 bits (132), Expect = 5e-21 Identities = 340/508 (67%), Gaps = 26/508 (5%) Strand=Plus/Plus Query 2069253 GTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGT 2069312 ||||| ||| ||||||||||||||||| || || ||||| || || |||||| ||| || Sbjct 907845 GTCGATGGTGAACTGGATGGCGTTGGCAGCCGGGCGGGTACGGAGGTAGTACTGGCCAGT 907904 Query 2069313 CTTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGA--TG-GACTCGGCATTCGG 2069369 |||||| ||||| ||| ||||| ||||||||| |||| || || | | || Sbjct 907905 CTTGAGTCCGCGCTTCCAGCCGTAGAAGTGCATCGAGGTGAGCTGCGAGAACGAA--GGG 907962 Query 2069370 GACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGC 2069429 || || || || |||||||||||| |||||||| | | | ||||||||||| Sbjct 907963 TTCGACA-GGTGGATGTTGAGCGACTGCGACTGGTCGATGAACGCGCCACGGTCGGCCGC 908021 Query 2069430 CATGTCGATGGTCACGCGGTTG-GACACCTCCCACACGGTCTTGAACAGGGCCTTGAGAT 2069488 | ||| || | || | || ||||||||||| || |||||| | | |||||||| | Sbjct 908022 AAGGTCAAT-GACAGCCTTCTGCGACACCTCCCAAACAGTCTTGTAAATTGCCTTGAGCT 908080 Query 2069489 GCGGCGGCACCTCG-TCGTCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGAGGCGG 2069547 || || | || || | ||| | |||||| | || |||| | || Sbjct 908081 -------CATCTGGAATGTTGGGAATGTGCTGGATCGAGCCACCGGAGGCAATGATGAGG 908133 Query 2069548 TCGCGAAAGTCGGGCGT-CCACAGGCCGCGCGCCATCATG---CGCTCGA-CCAGGTGGC 2069602 | | ||| ||| ||| | ||| | || | | || || ||||| ||| Sbjct 908134 TTCTTCATGTC-CTCGTCCCAGATGCCCAGGTTGATGAGGTCACGGAGGAGCCAGG-GGC 908191 Query 2069603 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGA 2069662 | |||| | ||||| ||||||||||| ||||| | ||||| | ||| | Sbjct 908192 AGACGACCTGG---AAGTCACCCGAGAGCACACGGCGAGCGTAGAGCATCGAGGTGTAGG 908248 Query 2069663 CCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 2069722 |||| | |||| | ||| ||||||||||| |||| ||| ||||||||| |||| | Sbjct 908249 GCTCGAAGCACTCGTTCCAGCCAAGGATCTGCGAGGTCGAGGCAGTGGGCATGGGCGCGA 908308 Query 2069723 CGAGCAGCGAGTTGCGCAGGCCGTACTG 2069750 | || ||||||||||| | |||| ||| Sbjct 908309 CAAGGAGCGAGTTGCGGACACCGTGCTG 908336 >seq7 Length=1238362 Score = 167 bits (184), Expect = 4e-35 Identities = 287/412 (70%), Gaps = 6/412 (1%) Strand=Plus/Plus Query 2019032 GGGCCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGCCTGGCGCGCGTGCTCTTGGG 2019091 ||||| ||||| | |||||||| || ||| ||||| |||| || ||| |||| Sbjct 465920 GGGCCTCCCCGGTATCGGCAAGACGACCTCAATCCACTGCCTCGCGCACGCCCTCCTGGG 465979 Query 2019092 CGCGGCCGCCGACGAGGCCGTGCTCGAACTCAATGCGTCAGACGAGCGCGGCGTGGACGT 2019151 | | ||| | ||| | ||| ||||| ||||| || || |||||||||||| | ||||| Sbjct 465980 CCCAGCCTACCGCGAAGGCGTCCTCGAGCTCAACGCCTCCGACGAGCGCGGCATCGACGT 466039 Query 2019152 CGTGCGTAGAATCATCAAG--CATCACGCTTCGAAAAGAATCGACCTGCCGCCCGGCCGC 2019209 ||||| | | |||||| | | ||| || || | || ||| || ||||| || Sbjct 466040 GGTGCGCAACAAGATCAAGTCCTTTGCGCAGCGCAAGG--TCACCCTCCCACCCGGGCGG 466097 Query 2019210 CACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTC 2019269 |||||| | |||||||||| |||||||||| | || ||| ||||||||||| || Sbjct 466098 CACAAGATCGTCATCCTCGACGAGGCCGACTCGATGACCGCGGGCGCCCAGCAGGCGCTG 466157 Query 2019270 CGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCG 2019329 || || ||||||| |||| |||||||||||| || ||||| || ||||||| | Sbjct 466158 CGCCGCACGATGGAAATCTACAGCAACACGACGCGCTTCGCGCTCGCGTGCAACATGAGC 466217 Query 2019330 TCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACC 2019389 | | ||||||| | ||||| || || |||||| |||| | || || | Sbjct 466218 AACAAGATCATCGAGCCGATCCAGTCGCGCTGTGCCATCCTGCGGTACTCGAAGCTGCGC 466277 Query 2019390 GACGCCCAGATCGCCG-CGCGTCTGCGCGAGATTATCGACGCCGAAAAGGTC 2019440 |||||| || | || | |||||| |||||| || |||||| |||||| Sbjct 466278 GACGCCGAGGT-GCTGAAGCGTCTCGAGGAGATTTGCGCCGCCGAGAAGGTC 466328 >seq3 Length=3502833 Score = 131 bits (144), Expect = 3e-24 Identities = 215/308 (70%), Gaps = 4/308 (1%) Strand=Plus/Minus Query 429513 CAGATCGGGTGGACCGTCGAGCGCCACCTGCGCACCGGCGACCCCGTGGTCATGAACCGG 429572 ||| | ||||||| || ||||| ||||| ||||||| ||| | | ||||| Sbjct 404756 CAGTTTGGGTGGATTGTGGAGCGTCACCTCAAGGACGGCGACTACGTTCTGTTCAACCGT 404697 Query 429573 CAGCCGTCGCTCCACATGGGGTCGATGCTCAACCACAAGGTGGTGCCCATGCCCGGTCGC 429632 ||||||||||| |||| | ||| ||| | | ||| || | |||| | | Sbjct 404696 CAGCCGTCGCTGCACAAGATGTCCATGATGAGTCACCGCGTCAAGGTCATGAACTACTCC 404637 Query 429633 ACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGAG 429692 |||||||| ||||||||| | || || | |||||||||||||| || || |||||| Sbjct 404636 ACCTTCCGTCTCAACCTGTCTGTCACCTCGCCTTACAACGCCGACTTCGATGGAGACGAG 404577 Query 429693 ATGAACCTGCACGTGCCCCAGTCGGAGATGGCACGCGCCGAAGTCGCCCACA--CCATGG 429750 |||||| |||||||||| ||||| ||| | |||| ||||| | ||| | ||||| Sbjct 404576 ATGAACTTGCACGTGCCTCAGTCCGAGGAGACACGTGCCGAGCTGAGCCAGATTGCATGG 404517 Query 429751 GCGTGGCCCTCAAGGCCGTGTCGCCGCAGGCCAACAAGCCCATCATCGGGCTCGTGATGG 429810 || | | | || | | ||||||||||||||||||||| |||| || | ||| || Sbjct 404516 --GTCCCGCGCCAGATCATCTCGCCGCAGGCCAACAAGCCCGTCATGGGTATTGTGCAGG 404459 Query 429811 ACGCCCTC 429818 || | ||| Sbjct 404458 ACACGCTC 404451 Score = 89.7 bits (98), Expect = 8e-12 Identities = 119/162 (73%), Gaps = 4/162 (2%) Strand=Plus/Minus Query 429067 TCAAGGGCAAGGAGGGCCGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAACTTTACGG 429126 ||||||||||||||||||| | || || || |||||||||||| ||| |||| | | Sbjct 405049 TCAAGGGCAAGGAGGGCCGTCTTCGTGGAAACCTCATGGGCAAGCGTGTCGACTTCTCCG 404990 Query 429127 CGCGCGCCGTCATCAGTCCCGACCCCGAAATCGACATTGACGAGGTGGGCGTGCCCTATG 429186 | || ||||||| | | |||||| | ||| | | ||| |||| |||||||| | | Sbjct 404989 CTCGTACCGTCATTACTGGTGACCCCAACATCCAGCTCGACCAGGTCGGCGTGCC--ACG 404932 Query 429187 -AG-ATCGTCAAGACGCTCACCTTTCCCGAGCGCGTGACGCC 429226 || || | || || ||||||| || || ||||||||||| Sbjct 404931 CAGTATTGCCATGATCCTCACCTACCCGGAACGCGTGACGCC 404890 Score = 87.8 bits (96), Expect = 3e-11 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081 |||||| ||||||||||| ||||||||| || || |||| ||| ||| | Sbjct 403652 CCCGAGTCGCGCGGCTTTGTCGAGAACTCGTACCTACGTGGTCTCACGCCGCAAGAGTTC 403593 Query 431082 TTTCTGCACATGATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAG 431141 || | ||| || || || || || ||||| |||| || ||||||||||| |||||| Sbjct 403592 TTCTTCCACGCCATGGGTGGTCGTGAAGGTCTTATCGATACCGCCGTCAAGACTGCCGAG 403533 Query 431142 ACGGGCTACATCCAGCGTCGGTGCATCAAATCGATGGAGAGCCTGCAGATCAAGCGCGGC 431201 || || ||||| || || || |||| | ||||| ||| || || || | Sbjct 403532 ACTGGTTACATTCAACGACGACTGGTCAAGGCCATGGAAGACCTCAAGGTCGGCTACGAC 403473 Query 431202 GGCCTCGTGCGCAACGCCAACGGCGACATTGTCCAGTT 431239 ||| ||| |||||| | ||| | |||||| ||||||| Sbjct 403472 GGCACCGTCCGCAACTCGAACAGTGACATTATCCAGTT 403435 >seq1 Length=4238441 Score = 111 bits (122), Expect = 2e-18 Identities = 133/177 (75%), Gaps = 4/177 (2%) Strand=Plus/Minus Query 1485485 CCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGG 1485544 |||| || ||||| || | ||||||| ||||||| ||||| | ||||| || || |||| Sbjct 3427922 CCTTTGTGCCCTCAGACATGGCGTGCTTGGCCAGCTCGCCAGGGATGATGAGACGGACGG 3427863 Query 1485545 CGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGC--GGCC 1485602 ||||||||||||||||| | |||||| |||||| || |||| | || || | Sbjct 3427862 CGGTCTGGATCTCGCGGCTAGAAATCGTGGCCTTCTTGTT-GTACGCGGCGAGCTTGGAC 3427804 Query 1485603 GGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACAT 1485659 |||||| | |||| || |||| ||||| ||||| |||||||| | ||||| ||| Sbjct 3427803 -GCCTCGACGGCGATACGCTCGAAAATGTCCTTGACGAACGAGTTGAGGATCGCCAT 3427748 Score = 102 bits (112), Expect = 1e-15 Identities = 158/216 (73%), Gaps = 11/216 (5%) Strand=Plus/Minus Query 2411386 TCAATCTTGGAGGCGGCCTC-GCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCAC 2411444 ||||||||||| ||| || | | || |||||||||| || | ||| || || || Sbjct 3022879 TCAATCTTGGACTTGGCGTCCGACGACGA-CATCTTGCCGCCC---GAGAGACCGGGGAC 3022824 Query 2411445 CAGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGT-CGCG-C 2411502 || | ||| | |||||| ||||||| |||||||| | || |||| || || | | Sbjct 3022823 CATGGCGTTCATGAGGTGGGCGCGCTTGGCGTAGCCCATCTTGGGGAGGTAGTGCGAGGC 3022764 Query 2411503 GCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGC 2411562 | | | | |||||||||||||||||| ||||||||||| || |||||||||| | Sbjct 3022763 GTACATG--AAGATCTTGCGCTGGTCGACACCGCCAAACTGCATGTGCACGTCGAGGTAC 3022706 Query 2411563 TGCTCGTCGAGGGCCTGCATGAGC-GGGTAGACGAG 2411597 ||||| ||||| ||||| | || | ||||||| ||| Sbjct 3022705 TGCTCATCGAGCGCCTGGA-GACCGGGGTAGAGGAG 3022671 >seq4 Length=3284570 Score = 86.0 bits (94), Expect = 1e-10 Identities = 153/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 118710 GCGATCTGGCGCGTGAGCGCCTCCTGCACCTGGAAGCGGTCCGAGAGCATGTCGACGATG 118769 |||| |||||| || || |||||| ||||||| ||| || | | | || |||| Sbjct 2948335 GCGACCTGGCGGGTAAGACGCTCCTGGACCTGGAGACGGCGCGCAAACGTCTCTGCGATA 2948276 Query 118770 CGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGC-GGGCAGGTAGCCCACGTGCGCCTT 118828 |||| | |||||| ||||| | | | ||| | ||| | |||||| | | ||| Sbjct 2948275 CGCGCCAGCTTGCTGAGGCCAAGCA-CGTGCTTGTTGGGGATGTAGCCGATGGAGATCTT 2948217 Query 118829 GCCGATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCAATGTCGCGCACGGT 118888 ||| | || |||| || |||||||| |||| ||| ||| |||||||||||| ||| | Sbjct 2948216 GCCCGTGAACGGCACGAGGTGGTGCTCACACAGCGAGTAAATGTCAATGTCGCGGACGAT 2948157 Query 118889 CACCATCTCGCCCGACGT-CTCGGCAAAGAGGGCGTCG 118925 ||||||||| || || |||| |||| | ||| ||| Sbjct 2948156 GACCATCTCG-TCGTGGTCCTCGTCAAACACGGCATCG 2948120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916243315137731