Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq5 279 5e-70 seq6 179 4e-40 seq8 118 1e-21 seq2 113 4e-20 seq3 82.4 7e-11 >seq5 Length=2501492 Score = 279 bits (308), Expect = 5e-70 Identities = 1206/1879 (64%), Gaps = 61/1879 (3%) Strand=Plus/Plus Query 147935 GTAGGCAGCGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGC---CA 147991 || |||||| || | || || || |||||| ||| |||||||| || |||| || Sbjct 907866 GTTGGCAGCCGGGCGGGTACGGAGGTAGTACTGGCCAGTCTTGAGTCC---GCGCTTCCA 907922 Query 147992 TGCGTAGTCGTGCACCGACGACATGAGCGTGTACGTCGGGTGCGGCACAAACAGATTAAA 148051 ||||| ||||| ||| | | ||| | ||| |||| || || | || | Sbjct 907923 GCCGTAGAAGTGCATCGAGGTGAGCTGCGAGAACGAAGGGTTCGACAGGTGGATGTTGAG 907982 Query 148052 CGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTAT 148111 |||||| |||||| ||||||||||||||||| || || | ||||||| ||| Sbjct 907983 CGACTGCGACTGGTCGATGAACGCGCCACGGTCGGCCGCAAGGTCAATGACAGCCTTCTG 908042 Query 148112 CTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCG 148171 | || |||||| | |||||||| | ||||| | ||| |||||| | ||| | Sbjct 908043 CGACACCTCCCAAACAGTCTTGTAAATTGCCTTGAGCTCATCTGGAATGTTGGGAATGTG 908102 Query 148172 CTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAG 148231 ||| | |||||| | | |||| || | || ||| || || | | | || Sbjct 908103 CTGGATCGAGCCACCGGAGGCAATGATGAGGTTCTTCATGTCCTCGTCCCAGATGCCCAG 908162 Query 148232 CTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCG 148291 | ||| |||||| || || | | || ||||| || || || | |||||| || Sbjct 908163 GTTGATGAGGTCACGGAGGAGCCAGGGGCAGACGACCTGGAAGTCACCCGAGAGCACACG 908222 Query 148292 CCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGC 148351 || || | | || | || || || ||||||| ||| | ||||||| Sbjct 908223 GCGAGCGTAGAGCATCGAGGTGTAGGGCTCGAAGCACTCGTTCCAGCCAAGGATCTGCGA 908282 Query 148352 GGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTAT 148411 ||||| || ||||||||| ||| || || ||||||||||| | |||| | | || Sbjct 908283 GGTCGAGGCAGTGGGCATGGGCGCGACAAGGAGCGAGTTGCGGACACCGTGCTGAGCGAT 908342 Query 148412 TTTG-CGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCC-ACATGTCG 148469 ||| ||| || | | |||||||||||| | || || |||| || | | |||| Sbjct 908343 GTTGGCGCGG-AGCTCGGTCCAGTCCCAGAG-GTCGGTGGGCACACGGCCCCAGAGGTCG 908400 Query 148470 TACTGCAGAATGCCGCGGCTAGCGGGGCT-GCCCTCGTACGAGCTGTACGGTCCGTGCGC 148528 || || | || | || || ||| ||||||||| | | |||| || | | Sbjct 908401 GGTTGGAGCTTACC-CTGCGAGATAGGCGAGCCCTCGTAGGTGGGGTACTTGCCAAACTC 908459 Query 148529 CGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCT 148588 | |||| ||||| || |||||| || ||| ||| || ||||| || | Sbjct 908460 CTGGGCCATCTCGCACGACGACTCGAGGGCAGCGTGGTAGATGGTCTCAAAGATCTTGAG 908519 Query 148589 GTTGAGCAGCGCCGCCGACTCGCTT-TCGTACGGCATACGCAGCCGCACAAACGCGTCGG 148647 ||| ||| | | | || | || ||| | ||||| || || || || | ||||| Sbjct 908520 GTTAAGCT-CACGGGCGGCAGGCGAGTCGAAGGGCATGCGGAGAGCCATGAAGGTGTCGG 908578 Query 148648 CAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT 148707 |||| || || ||||| | || | ||| ||||| |||||| | ||| || || Sbjct 908579 CAAGACCTTGCACGCCGAGACCGACGGGGCGGTGGCGCATGTTGCTGTTGCGAGCCTCCT 908638 Query 148708 CGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAA 148767 ||| || |||| ||| | ||||| || ||| || || ||| ||||| || | Sbjct 908639 CGACGGGGTAGTAGTTCTTGGTGATGACCTGGTCGAGGTTCTTGGTCACAACCTTGGTGA 908698 Query 148768 TTCTGCGCAGCAATTCAAAATCGTACT------TGTCA---TCTACGAT-GCATCGGTTC 148817 | | ||||| | ||| |||||| | ||| || || | ||| | Sbjct 908699 TCTCGTGCAGCTTCTTAAAGTCGTACGACTGGCTCTCAATGTCGACAAACGCAGGG---- 908754 Query 148818 ACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATC 148877 | ||| || ||||| || ||||| ||||| ||| || ||||| |||||| | |||| Sbjct 908755 AGGGCAATCGAGGCCAGGTTGCAGACGGCGACCTCGTCGGGGGCCGAGTACTCGATGATC 908814 Query 148878 TCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTG 148937 || | ||| || ||| | ||||| ||| | || || || ||| |||||||||| Sbjct 908815 TCAGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTGGACTTGCTGTTG 908874 Query 148938 CACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--A 148995 ||||||||||| |||||| | || || ||||| || ||| | || | ||| | Sbjct 908875 GCAGCGTCCTTGTAGAGCATGAAGGGACCACCAGTCTCGGTCTGGGCCTCGAGGATGGCA 908934 Query 148996 ACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCT--CCTGC----TCGT 149049 | | | || | ||| || |||| || || | |||||||| || || |||| Sbjct 908935 AACCAG--AGCTTCTGGGC-----CTTGATGGTCTT-GCGACCCTTGCCGGCAGCCTCGT 908986 Query 149050 ATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGT 149109 | || ||| ||| ||| |||| || | ||| ||||||||||||||| | Sbjct 908987 AGCTCTCGTAGAGCTTCTCAAACTCCTCCGAGTGGACGTCGGCGAGACCGGGGCACTCGG 909046 Query 149110 GCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCA 149169 ||||||||||| | ||| ||||||| || | || |||||||| || || ||||| | Sbjct 909047 CAGGGCACATGAGGGTCCAGTCGCCGTCGGCCTCGACACGCTTCATGAAAAGGTCGGGGA 909106 Query 149170 CCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCA 149229 |||||| ||||| | |||||| || || || || ||| ||| ||| | Sbjct 909107 TCCAGAGAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGA 909166 Query 149230 GGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCT 149289 ||| ||| | | ||| | ||| |||||||| ||||| | ||| | |||| ||| || Sbjct 909167 GGTCGAGGAAGTCGAACACGTCGGCGTGCCAAGGCTCGAGGTAGATGGCGAACGCACCAG 909226 Query 149290 TGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAG 149346 |||| ||||| ||||||||||||| || | || || | | || | ||| | Sbjct 909227 GGCGCTTGTTGCCTCCCTGGTCGACGTAACGGGCAGTGGCGTCGTAGGCGCGGAGCATGG 909286 Query 149347 GTTCAATGCCACTGGCAGT-GCCGTTAGTAGAGCTAATG--CGACTGCCGCGCGCTCGCA 149403 | | || || | | ||| |||||| ||| | |||| ||| ||| || || | Sbjct 909287 GGACGATACCGTTCG-AGTAGCCGTTGGTACCGGCAATGTACGA--GCCCTTGGCGCGAA 909343 Query 149404 CTTTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCG 149462 ||||| | || || ||||| || || || || ||| ||||| |||||| | Sbjct 909344 TGTTGTGGATGTGGAGACCGATACCACCAGCAGT-CTTGGAGATCTGAGCGCAGGTCTTG 909402 Query 149463 AGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCAC 149522 || || ||||||||| || || |||| |||||||| | ||||||||||| || Sbjct 909403 AGGGTGTCGTAGATGCCGTCAATCGAGTCGTCCTTCATGGCGACGAGAAAGCACGACGAC 909462 Query 149523 ATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTC 149582 || || || | || ||||| ||| | ||| || ||||| || || || | Sbjct 909463 ATCTGGGGGTGGGGGGTACCGGCGTTGAAGAGGGTTGGCGACGCGTGGGTGAAGTAACGC 909522 Query 149583 TGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATG 149642 | ||| | | ||||| |||||||| || |||| ||||| ||||| || || Sbjct 909523 TCCGACATGAGGTTGTACGTGTCGAGCACCTTCTCAATGTTGTCGCCGTGGATACCAATA 909582 Query 149643 GCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTG---AGC 149699 ||||| ||||| | ||| ||||| || ||||| || || ||| || | || || Sbjct 909583 GCGACACGCATGATCATGTGCTGGGGACGCTCGGCGACCTTG---CCGTTGATGCGCAGG 909639 Query 149700 AAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGG 149759 | ||| | || || |||||| |||||||||| ||||| |||||||||| ||| | Sbjct 909640 AGGTACGAGCGCTCGAGGGTCTTGAAGCCAAAGTAGTTGTACGAAAAGTCGCGGTCGTAG 909699 Query 149760 TCAATGGCGGCGTCGATCA 149778 ||||| | ||||| || Sbjct 909700 ATGATGGCCGAGTCGAGCA 909718 >seq6 Length=2185627 Score = 179 bits (198), Expect = 4e-40 Identities = 365/534 (68%), Gaps = 21/534 (4%) Strand=Plus/Minus Query 120363 GACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAA 120422 |||||| ||| || ||||||| ||||||| | ||| || | | |||||| ||||| Sbjct 95086 GACGCGCGACTCGAAGAAGTTTGCCTTGCCCTGGAGCGAGATCATCTCCATAAAGTCGAA 95027 Query 120423 CGGGTTGCTCGCGTTA-AAGTATT-TCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCT 120480 ||||| | ||| || | || ||| | ||| | | |||||||| ||||| || Sbjct 95026 TGGGTTTGCAGAGTTGTAAATCTTGTCG--TTGCCGAGCGCGACGAGCAGGCGGTCGGCG 94969 Query 120481 ACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAAC 120540 |||||||||||||||| ||||||| | ||||||||||| | | || || || | Sbjct 94968 ACAAACTCAATGTACTGGCACATGAGCGCGGCGTTCATGCCGATGAGCGAGACGGGGAGG 94909 Query 120541 GCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCT---TGAACATGGCGAGCATA 120597 || |||| ||||| | ||| || | || ||||| ||| |||| || | Sbjct 94908 GCGTCTGTGAGGAACTCTTGCTCGATCGCAACGGCCTCGCGGATGATCATGTTGA---TG 94852 Query 120598 GTGTGGCCGGGCATCTTGTGTTCGATGC--GCGTTCGGT--AGTACAGGCACGCAAAGTC 120653 |||| | ||| || | || | | | | ||| || |||||| |||||||| Sbjct 94851 GTGT--CTGGG-----TGAGGGCGGCGGCGGAGGTGGGTGAAGAGCAGGCAGGCAAAGTC 94799 Query 120654 CGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGAT 120713 ||||| || |||||||||||||| || ||||||||| || || || |||||||||| Sbjct 94798 GGTGTGGAGACCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAG 94739 Query 120714 GCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCAC 120773 || | |||||| |||| |||| |||||| |||||| ||||| | |||||| || Sbjct 94738 ACCGCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAGAAGATGCCCTCGAC 94679 Query 120774 GATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACTTCAT 120833 | ||||||||||| | |||||||| |||| || ||||| ||||| || | Sbjct 94678 GGCGGCAAAGGCGATAAGACGCTCGGCAAACGACGAGTTCTTGTCAGAAATCCAGTTGAG 94619 Query 120834 GGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAG 120887 ||||| |||||||| || | ||| || || ||| | |||||| | ||| Sbjct 94618 CGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGTTCTCAATCGCGTTGAACAG 94565 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || ||| ||| | ||||||||||||||||| Sbjct 20659 GTCGACTCCTTCTGGATGTTGTAGTCGGACAGCGTACGACCA-TCCTCGAGCTGCTTGCC 20601 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || ||||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct 20600 AGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTT 20541 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||||| | ||| || |||| |||| || |||||||| || || Sbjct 20540 GACATTGTCGATCGTGTCGGACGACTCGACCTCGAGAGTGATCGTCTTGCCGGTGAGGGT 20481 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 20480 CTTGACGAAGATCTGCAT 20463 Score = 122 bits (134), Expect = 8e-23 Identities = 128/167 (77%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 116483 ACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAACACTTCAACC 116542 |||| ||||||||||| |||| | |||||||||||||| ||||||| |||||||||| Sbjct 1016959 ACGTTCACGAGTTTGGAGACAACTCGAACGGCTGCACCTCGGCCGGCGGCCACTTCAACC 1016900 Query 116543 CCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGTGACCTGGGCA 116602 | ||| || ||||||| || |||| |||||||| || |||||||||||||| |||| Sbjct 1016899 CATTTGGCAAGAACCACGGTGCCCCCACCGCCGCCGACCGCCACGTCGGTGACCTCGGCA 1016840 Query 116603 ACATTGAGGCCAAAGTGTCCAACGCGCTCACTGCCGTGGACAAGATC 116649 || | || || | | |||| | |||||||| | ||||||| Sbjct 1016839 ACGTCAAGACCGACG---CCAA---GGGCACTGCCGACGTCAAGATC 1016799 Score = 120 bits (132), Expect = 3e-22 Identities = 132/176 (75%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||| || | ||| |||||||||||||||||| Sbjct 20203 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGTCCGTCCTCGAGCTGCTTGCCG 20144 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| |||||||||||||| |||||||| |||||||| |||||| |||| Sbjct 20143 GCGAAGATGAGGCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 20084 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAG 133639 | | || | ||||| | | ||| || |||| ||||| ||| || |||||||| Sbjct 20083 ACGTTGTCGATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTTCCGGTCAG 20028 Score = 113 bits (124), Expect = 4e-20 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||| ||| | ||||| |||||||||||||| |||||||| ||||| Sbjct 19823 GTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTT 19764 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | || | ||||| | | ||| || |||| ||||| Sbjct 19763 GTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCTGACGACTCGACCTCGAGGGTGAT 19704 Query 133625 GGTTTTGCCGGTCAG 133639 ||| |||||||| || Sbjct 19703 GGTCTTGCCGGTGAG 19689 Score = 102 bits (112), Expect = 8e-17 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || ||||| || || || ||| ||||||||||||||||| Sbjct 20431 GTGGACTCCTTCTGAATGTTGTAGTCCGACAGAGT--ACGGCCGTCCTCGAGCTGCTTGC 20374 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || || |||||||||||||| ||||| || |||||||| ||||| || Sbjct 20373 CGGCAAAGATAAGACGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGAATCTTGCTCT 20314 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | |||||| | | ||| || |||| || | || || ||||| || | Sbjct 20313 TCACATTGTCGATGGTGTCGCTAGACTCGACCTCGAGAGTAATCGTCTTTCCGGTGAGGG 20254 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 20253 TCTTCACAAAGATCTGCAT 20235 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/134 (75%), Gaps = 2/134 (1%) Strand=Plus/Minus Query 116472 GCACGGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGC-TGCACCTCCGCCGGCG 116530 || |||||||||||| ||| | ||||||||| | | ||| |||| |||| || | Sbjct 1023430 GCGCGGCTTCCACGTCCACACCTATGGCGACAC-ATCTGCGGGATGCAACTCCTGTGGGG 1023372 Query 116531 AACACTTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCG 116590 ||||| ||||| ||| || ||||||| | ||||| |||||||| || ||||||| Sbjct 1023371 CCCACTTTAACCCATTTGGCAAGAACCACGGTGGGCCCACCGCCGCCGACCGCCACGTCG 1023312 Query 116591 GTGACCTGGGCAAC 116604 ||||||| |||||| Sbjct 1023311 GTGACCTCGGCAAC 1023298 >seq8 Length=1129179 Score = 118 bits (130), Expect = 1e-21 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||| ||| | ||||| ||||||||||| ||||||||||| ||||| Sbjct 496505 GTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGAGGGATGCCCTCCTT 496446 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | || | ||||| | || |||||| |||| ||||| Sbjct 496445 GTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCGAGGGTGAT 496386 Query 133625 GGTTTTGCCGGTCAG 133639 ||| ||||| || || Sbjct 496385 GGTCTTGCCCGTAAG 496371 >seq2 Length=3675159 Score = 113 bits (124), Expect = 4e-20 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 133505 GTCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTT 133564 |||||||||||||||||| ||| | ||||| ||||||||||| || |||||||| ||||| Sbjct 1356149 GTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTT 1356208 Query 133565 GTCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 ||| |||||| ||||| | || | ||||| | || |||||| |||| ||||| Sbjct 1356209 GTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCGAGGGTGAT 1356268 Query 133625 GGTTTTGCCGGTCAG 133639 ||| ||||| || || Sbjct 1356269 GGTCTTGCCCGTAAG 1356283 Score = 104 bits (114), Expect = 2e-17 Identities = 129/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| || ||||| || | ||| |||||||||||||||||| Sbjct 2842996 GGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 2843055 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||||||||| || |||||||| |||||||| |||||| ||| Sbjct 2843056 GGCGAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTT 2843115 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAG 133639 || | || | ||||| | || ||| || || | ||||| ||| ||||| || || Sbjct 2843116 GACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAG 2843172 >seq3 Length=3502833 Score = 82.4 bits (90), Expect = 7e-11 Identities = 167/243 (69%), Gaps = 9/243 (4%) Strand=Plus/Minus Query 120534 CGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGAG 120593 ||||| |||| |||| |||||||||||||| || || ||||| ||| || | | | Sbjct 1065148 CGGCAGCGCCTCTGTGAGGAACTCCTTCTCAATCTCAACTGCCTCGCTGATAATCGTGTG 1065089 Query 120594 CATAGTGTGGCCGG-GCATCTTGTGTTCGA--TGCGCGTTCGGTAGTACAGGCACGCAAA 120650 | || ||| |||| | ||| | || || ||| | | || |||| ||||| Sbjct 1065088 GACCTCGTCCTCGGTGCAT-TGGTGCTTGAGGTGGCCGTACAGGAG-ACAG----GCAAA 1065035 Query 120651 GTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCAT 120710 ||| || || ||||||||||||||| || ||||||||| || || ||||| |||| Sbjct 1065034 GTCGGTATGTGTGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCACGCAT 1064975 Query 120711 GATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTC 120770 || || | |||| | |||| ||||| || || ||| |||||||| | ||||| Sbjct 1064974 GAGTCCGCGCTTCTTCAACCAGAAGATGGCAGCGAACGAGCCAGAAAAGAAGATCCCCTC 1064915 Query 120771 CAC 120773 || Sbjct 1064914 GAC 1064912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420624759960