Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq5 232 1e-54 seq6 183 4e-40 seq7 159 5e-33 seq3 114 2e-19 seq1 114 2e-19 seq4 89.7 7e-12 >seq5 Length=2501492 Score = 232 bits (256), Expect = 1e-54 Identities = 358/508 (70%), Gaps = 25/508 (5%) Strand=Plus/Minus Query 259680 AGCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACT 259739 ||||||||||||| |||||| | |||||| | ||| ||| |||||| ||| |||| Sbjct 909730 AGCACAAGGAGGTGCTCGACTCGGCCATCATCTACGACCGCGACTTTTCGTACAACTACT 909671 Query 259740 TTGGTCTGGCGACCTT---GCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCG 259796 |||| | |||| | |||| || | |||| || | || | |||| || Sbjct 909670 TTGGCTTCAAGACCCTCGAGCGCTCGTACCTCCTGCGCA---TCAACGGCAAGGTCGCCG 909614 Query 259797 AGCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCG 259856 |||| |||||| | ||| ||||||||||||| |||| ||| | ||| || Sbjct 909613 AGCGTCCCCAGCACATGATCATGCGTGTCGCTATTGG----TAT--------CCACGGCG 909566 Query 259857 ACAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCT 259916 |||| | ||| | ||||||| ||| ||| | ||||||| ||| | |||||| Sbjct 909565 ACAACA---TTGAGAAGGTGCTCGACACGTACAACCTCATGTCGGAGCGTTACTTCACCC 909509 Query 259917 CAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTC 259976 ||| |||| || ||||| || ||||| || || | ||| |||| ||||||||||||| Sbjct 909508 ACGCGTCGCCAACCCTCTTCAACGCCGGTACCCCCCACCCCCAGATGTCGTCGTGCTTTC 909449 Query 259977 TGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGC 260036 | | | |||||||| ||| ||||| || |||||||| ||||| |||||| ||||| | Sbjct 909448 TCGTCGCCATGAAGGACGACTCGATTGACGGCATCTACGACACCCTCAAGACCTGCGCTC 909389 Query 260037 TCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCA--CACAAGGTGCGCGCCGCGGG 260094 ||||||||| | || || || |||||| | || || ||||| | |||||| ||| Sbjct 909388 AGATCTCCAAGACTGCTGGTGGTATCGGTCT--CCACATCCACAACATTCGCGCCAAGGG 909331 Query 260095 CGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTT 260154 | | ||| | || || ||||||||| | || ||||| | || |||||||| |||| | Sbjct 909330 CTCGTACATTGCCGGTACCAACGGCTACTCGAACGGTATCGTCCCCATGCTCCGCGCCTA 909271 Query 260155 TAACGACACGGCGCGCTACGTCGACCAG 260182 ||| ||| || || |||||||||||| Sbjct 909270 CGACGCCACTGCCCGTTACGTCGACCAG 909243 Score = 161 bits (178), Expect = 1e-33 Identities = 187/249 (75%), Gaps = 10/249 (4%) Strand=Plus/Plus Query 724896 TCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCA 724955 ||||||||||| | ||||||||||| ||||||||||| |||||| || | | | Sbjct 1319962 TCGTACTCGTCGTACATCTACAAGGTCCTCAAGCAGGTCCACCCCGACACTGGT-----A 1320016 Query 724956 TCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC 725015 || ||||||||| ||||| | ||| | ||||||||||| |||||| |||| |||||| Sbjct 1320017 TC-TCCAACAAGGCCATGGCCATCCTCAACTCGTTTGTTGCCGACATTTTCGAGCGCATC 1320075 Query 725016 GGCACCGAGGCCGGTCG--CCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCG 725073 | |||||||||| ||| || ||| | |||| | ||| || ||| |||||| Sbjct 1320076 GCCACCGAGGCC--TCGAAGCTCGCGTCGTACAACCACCGCTCGACCATCTCGTCGCGCG 1320133 Query 725074 AGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCG 725133 |||||||||| ||||| ||||| ||| | | ||| || || | | ||||||| |||| | Sbjct 1320134 AGATCCAGACTGCCGTCCGCCTCATCCTCCCCGGTGAGCTCTCGAAGCACGCCATCTCGG 1320193 Query 725134 AGGGCACCA 725142 ||||||||| Sbjct 1320194 AGGGCACCA 1320202 Score = 134 bits (148), Expect = 2e-25 Identities = 339/504 (67%), Gaps = 20/504 (4%) Strand=Plus/Minus Query 262912 CAGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAG 262971 ||||| || | ||||||||| | || || |||| ||||||||| ||| |||| |||||| Sbjct 908336 CAGCACGGTGTCCGCAACTCGCTCCTTGTCGCGCCCATGCCCACTGCCTCGACCTCGCAG 908277 Query 262972 ATCCTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTG 263031 ||||| ||| | |||| |||||| | ||| | ||||| | ||||| ||| Sbjct 908276 ATCCTTGGCTGGAACGAGTGCTTCGAGCCCTACACCTCGATGCTCTACGCTCGCCGTGTG 908217 Query 263032 CTCTCGGGCGACTTTACCGTGGTCAACCGCCACCTGG-TCAAGCG---CATGGTGGCGCG 263087 |||||||| ||||| | |||| | ||| ||||| || || | | | | Sbjct 908216 CTCTCGGGTGACTT---CCAGGTCGTCTGCC-CCTGGCTCCTCCGTGACCTCATCAACCT 908161 Query 263088 CGGCCTGTGG-ACGCCCGACTTTCGCGACCGGCTCATTGCGGCACAGGGCTCGGTGCAGG 263146 ||| | ||| ||| ||| | ||| ||||||| | |||||| | ||| Sbjct 908160 GGGCATCTGGGACGAG-GACATGAAGAACCTCATCATTGCCTCCGGTGGCTCGATCCAGC 908102 Query 263147 GCTTTGACGACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGG 263206 | || | || | || || |||||||| | | |||||| || ||||||| Sbjct 908101 ACATTCCCAACA------TTCCAGATGAGCTCAAGGCAATTTACAAGACTGTTTGGGAGG 908048 Query 263207 TGCC-CAACCGGGTGACCATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGC 263265 || | || || || | ||||| | ||||||||||| | | | |||||||| Sbjct 908047 TGTCGCAGAAGGCTGTC-ATTGACCTTGCGGCCGACCGTGGCGCGTTCATCGACCAGTCG 907989 Query 263266 CAGTCGCTCAACCTGTACCTCGCCGACCCGACGGCCGAG-AGCATCACGTCGATGCACGC 263324 |||||||||||| | |||| | |||| || | | ||| |||| ||||||||| Sbjct 907988 CAGTCGCTCAACATCCACCTGTCGAACCCTTCGTTCTCGCAGC-TCACCTCGATGCACTT 907930 Query 263325 CTATGCGTGGCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGC 263384 ||| | ||| ||||| |||||||||||| |||||| || || ||||| || ||||| Sbjct 907929 CTACGGCTGGAAGCGCGGACTCAAGACTGGCCAGTACTACCTCCGTACCCGCCCGGCTGC 907870 Query 263385 CAACGCCATTCAATTCACCGTCGA 263408 ||||||||| || |||||| |||| Sbjct 907869 CAACGCCATCCAGTTCACCATCGA 907846 Score = 114 bits (126), Expect = 2e-19 Identities = 333/513 (65%), Gaps = 18/513 (4%) Strand=Plus/Minus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 || ||| ||||||| || || || ||| |||||| || || |||||||||||| | Sbjct 909242 GGAGGCAACAAGCGCCCTGGTGCGTTCGCCATCTACCTCGAGCCTTGGCACGCCGACGTG 909183 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || ||| || |||||| |||||||||||||||| |||| || ||| || Sbjct 909182 TTCGACTTCCTCGACCTCCGCAAGAACCACGGCAAGGA----GGAGGTTCG--CGCTCGT 909129 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 || ||||| |||| || |||| |||||| || ||| || | | | ||| | || Sbjct 909128 GACCTCTTCTACGCTCTCTGGATCCCCGACCTTTTCATGAAGCGTGTCGAGGCCGACGGC 909069 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 |||||| | ||| | ||||| ||||| ||||| || ||| | | | || Sbjct 909068 GACTGGACCCTCATGTGCCCTGCCGAGTGCCCCGGTCTCGCCGACGTCCACTCGGAGGAG 909009 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCG---GACCGTCGTGCCC 262084 ||||| ||||| ||| || |||| || | || Sbjct 909008 TTTGAGAAGCTCTACGAGAGCTACGAGGCTGCCGGCAAGGGTCGCAAGACCATCAAGGCC 908949 Query 262085 GCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATG 262144 || || || |||||| ||||| ||| |||||| | |||||| || |||| |||| Sbjct 908948 -CA-GA-AGCTCTGGTTTGCCATCCTCGAGGCCCAGACCGAGACTGGTGGTCCCTTCATG 908892 Query 262145 GTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG 262204 ||||||||||||| | |||| | |||||||||| |||| ||||||| | | Sbjct 908891 CTCTACAAGGACGCTGCCAACAGCAAGTCCAACCAGCAGCACCTCGGCACCATCAAGTCG 908832 Query 262205 GCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAAC 262264 ||||||| ||||| |||||| || ||| ||| | ||| ||||| || |||||| Sbjct 908831 TCCAACCTCTGCACTGAGATCATCGAGTACTCGGCCCCCGACGAGGTCGCCGTCTGCAAC 908772 Query 262265 CT---CTCGAGCGTGGCCCTGCCCAAGTTTGTC 262294 || ||||| | ||||| || ||||||| Sbjct 908771 CTGGCCTCGA---TTGCCCTCCCTGCGTTTGTC 908742 Score = 105 bits (116), Expect = 1e-16 Identities = 300/449 (67%), Gaps = 28/449 (6%) Strand=Plus/Minus Query 2129426 CCTTGAGCAGGATCTCGGCAAACTCGGCCTCGGGGTCCGAGTCGGCGACG--ATGGCGCC 2129483 ||||| || | |||||| ||||| ||||| | ||||| | || ||| || || || Sbjct 674449 CCTTGGTGAGCACCTCGGCCCACTCGCCCTCGCGCTCCGA--CAGCCACGTAATCGCCCC 674392 Query 2129484 GCCGCAGCCCACCGACGCCGCGCCATCGGCGTCGATGACGGCCGTGCGGATCACCACCGA 2129543 ||| ||| | | | || | ||| | |||| || |||||||||||| || Sbjct 674391 GCCCGCGCCAATG--CTCAGCTGC-TCGCCCTCGAGCACCATCGTGCGGATCACGACACT 674335 Query 2129544 CAGCGAGCAGGCGCCGTCGGC---CGAAAAGAATCCCAACGCGCCCGAGTAGATCCCGCG 2129600 || || ||||| | || ||||||| | || | |||||| |||||||| ||||| Sbjct 674334 CA---AGTCGGCGCTGCCGCAGAGCGAAAAGTACCCGAGCGCGCCAGAGTAGATGCCGCG 674278 Query 2129601 TGGGCGATGCTCTTCAAGACGGTCCAAAATGTCCATGCTGCGCGCTTTGGGCGCGCCCGT 2129660 ||| | ||| | || | | ||||| | | || | |||| |||||||||||||| Sbjct 674277 CGGGTGGTGCGCCTCGAACCCGTCCAGGAGCTGCACGGAGCGCAGCTTGGGCGCGCCCGT 674218 Query 2129661 CATCGAGCCTGGGGGAAAAGCCGCGC-GCACGAGGTC--CAGCGCCGTCTGTTGTCGGTC 2129717 ||| ||||| ||||| |||| |||| ||| || | |||||| || ||| | | Sbjct 674217 CATGGAGCCCGGGGG-GAAGCAGCGCTTGACGCTCTCGACGGCGCCG-ATG-TGTGGCGC 674161 Query 2129718 CAACAGGCCGTCGACGGTGGTCACCATCTGGTGCACGGCGGCATAGGTCTCGATCGCCAT 2129777 || | |||| | |||||||| || | | ||||||| || || | ||||| || || Sbjct 674160 CAGCTGGCCCACCACGGTGGTGACGAGGTTGTGCACGCCG---TACGACTCGAGGGCGAT 674104 Query 2129778 CAGCCGGCCGCGCGGCACGACGACGCTGCCGGGCGCGCAGCACACGCTCAGGTCGTTGCG 2129837 || |||| || ||| || || |||||||| | ||||||| ||| Sbjct 674103 GAG------TTGCGGGACCGTCACGGTGGACGGGACGCAGCACGAGAGCAGGTCGGAGCG 674050 Query 2129838 CACCAGATCGACGATCATGAGGTTCTCGG 2129866 | || |||||||||||||||||||||| Sbjct 674049 GATTAGGTCGACGATCATGAGGTTCTCGG 674021 >seq6 Length=2185627 Score = 183 bits (202), Expect = 4e-40 Identities = 196/254 (77%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 1456522 GATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGC 1456581 ||||||| ||||||||| | ||||||| ||||||| ||| || | || || || | Sbjct 94861 GATCATCCGCGAGGCCGTTGCGATCGAGCAAGAGTTCCTCACAGACGCCCTCCCCGTCTC 94920 Query 1456582 GCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGC 1456641 ||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||| Sbjct 94921 GCTCATCGGCATGAACGCC-GCGCTCATGTGCCAGTACATTG-AGTTTGTCGCCGACCGC 94978 Query 1456642 CTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGAT 1456701 ||||||| ||||||||| | || ||| ||| | || ||||| ||| | || Sbjct 94979 CTGCTCGTCGCGCTCGGCAAC-GACAAGATTTACAACTCTGCAAACCCATTCGACTTTAT 95037 Query 1456702 GGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTACGC 1456760 |||| ||||||||||| |||||||| | ||||| |||||| ||||| | | ||| | Sbjct 95038 GGAGATGATCTCGCTCCAGGGCAAGGCAAACTTCTTCGAGTCGCGCGTCTCGGCCTACTC 95097 Query 1456761 CAAGGCCGGCGTCA 1456774 |||| | || |||| Sbjct 95098 CAAGTCGGGTGTCA 95111 Score = 165 bits (182), Expect = 1e-34 Identities = 279/394 (71%), Gaps = 14/394 (4%) Strand=Plus/Plus Query 1455922 GATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAA-GAGGTCCAATTGCCAGA 1455980 || |||||||| ||||||||| | || || ||| || ||||| || | || || Sbjct 94400 GACGGCATCGTCAACGAGAACCTTGTCGAGCG-TTTCTGCGGTGAGGTGCAGATTCCCGA 94458 Query 1455981 GGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTC 1456040 ||| || ||||| ||||||||| || || ||||| ||||| || || ||||| Sbjct 94459 GGCCAAGACATTCTACGGCTTCCAGATCATGATGGAGAACATTCACTCGGAGACGTACTC 94518 Query 1456041 GCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGG-ACCACCTCTTTCGCGCCA 1456099 |||||| |||||||| ||| | ||| | || | | || |||| || ||| | Sbjct 94519 GCTCCTCATCGACACGTACATTCGCGACAATG-CGCGCCGCCACTACCTGTTCAACGCGA 94577 Query 1456100 TCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCA---ACA 1456156 | || | | || | | | ||| ||||||||||||||| | || ||||| ||| Sbjct 94578 TTGAGAACATTCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAACTGGATTTCTGACA 94637 Query 1456157 AGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTT 1456215 || | |||| | ||||||||||| || ||| ||||||||| |||||||||||||| Sbjct 94638 AGAA----CTCGTCG-TTTGCCGAGCGTCTTATCGCCTTTGCCGCCGTCGAGGGCATCTT 94692 Query 1456216 TTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||||| || | ||||||| ||||||||||||||||| ||||||||||||| Sbjct 94693 CTTCTCGGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTC- 94751 Query 1456276 TCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 || ||| |||||| | ||| |||||||| Sbjct 94752 TCACCTTCTCCAACGAGCTCATCTCGCGCGACGA 94785 >seq7 Length=1238362 Score = 159 bits (176), Expect = 5e-33 Identities = 241/338 (71%), Gaps = 6/338 (2%) Strand=Plus/Minus Query 332876 CGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGA-CGTGTTGCAGGC 332934 |||||||||||||| || ||| | | |||||||| | ||| | | ||||||| || Sbjct 466261 CGCAGGATGGCACAGCGCGACTGGATCGGCTCGATGATC-TTGTTGCTCATGTTGCACGC 466203 Query 332935 CAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGGC 332994 || || || |||||||| ||| | | ||||||| || || || ||||| ||||| Sbjct 466202 GAGCGCGAAGCGCGTCGTGTTGCTGTAGATTTCCATCGTGCGGCGCAGCGCCTGCTGGGC 466143 Query 332995 CGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCCGTGCGGCAG 333054 ||| || | ||||||||||||||||||||| ||||||||| |||||| | || || Sbjct 466142 GCCCGCGGTCATCGAGTCGGCCTCGTCGAGGATGACGATCTTGTGCCGCCCGGGTGGGAG 466083 Query 333055 ATCAACCCTTTTCGAGGCG--TGGTGTTTGATGATCTTGCGCACGACGTCCACGCCGCGC 333112 ||| || || ||| | ||||| | |||||||| ||||| | ||||||| Sbjct 466082 GGTGACC--TTGCGCTGCGCAAAGGACTTGATCTTGTTGCGCACCACGTCGATGCCGCGC 466025 Query 333113 TCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGTCGGCGGCCGCACCCAAGAGGACGCGC 333172 ||||| || |||||||| ||||| ||| | ||| | ||| | |||| |||| || || Sbjct 466024 TCGTCGGAGGCGTTGAGCTCGAGGACGCCTTCGCGGTAGGCTGGGCCCAGGAGGGCGTGC 465965 Query 333173 GCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGCCGGG 333210 || ||||| ||| || |||||||| | ||||| Sbjct 465964 GCGAGGCAGTGGATTGAGGTCGTCTTGCCGATACCGGG 465927 >seq3 Length=3502833 Score = 114 bits (126), Expect = 2e-19 Identities = 202/291 (69%), Gaps = 5/291 (2%) Strand=Plus/Plus Query 1817497 CCGATGATGGGCTTGTTGGCCTGCGGCGACACGGTCTTGAGGGCCACGTTCATGG--TGT 1817554 || |||| ||||||||||||||||||||| | | ||| | | | || |||| | | Sbjct 404470 CCCATGACGGGCTTGTTGGCCTGCGGCGAGATGATCTGGCGCGGGACC--CATGCAATCT 404527 Query 1817555 GCGTCACCTCGGCGCGCGCGTC-TCAGACTGGGGCACATGGAGGTTCATCTCGTCGCCGT 1817613 | ||| |||||| || | || || ||||| ||||| || | |||||||||||| || | Sbjct 404528 GGCTCAGCTCGGCACGTGTCTCCTCGGACTGAGGCACGTGCAAGTTCATCTCGTCTCCAT 404587 Query 1817614 CAAAGTCGGCATTGTAGGTGCCCGTGACGGCCAGGTTGAACCGCATGGTACGGCCGGGCA 1817673 | |||||||| ||||| | ||||| | |||||||| || | ||| | | || Sbjct 404588 CGAAGTCGGCGTTGTAAGGCGAGGTGACAGACAGGTTGAGACGGAAGGTGGAGTAGTTCA 404647 Query 1817674 TGGGCACCACCTTGTGCATGAGCATGGAGCCCATGTGGAGTGAGGGCTGCCGGTTCATCA 1817733 || | || ||| | | |||||| | |||| || || ||||| ||||| | || Sbjct 404648 TGACCTTGACGCGGTGACTCATCATGGACATCTTGTGCAGCGACGGCTGACGGTTGAACA 404707 Query 1817734 CCACGGCGTCGCCGGCGCGCAGGTGACGCTCGACTGTCCACCCAATTTGCA 1817784 ||| ||||||| | ||||||||||| || ||||||||| |||| Sbjct 404708 GAACGTAGTCGCCGTCCTTGAGGTGACGCTCCACAATCCACCCAAACTGCA 404758 Score = 86.0 bits (94), Expect = 9e-11 Identities = 192/282 (68%), Gaps = 6/282 (2%) Strand=Plus/Plus Query 1818059 GAGGTCGCCCATGGTAAAGGGCGTCACGCGCTCGGGAAAGGTGAGCGTCTTGACGAT-CT 1818117 ||||| | | ||| | | ||||||||||| || || ||||||| || || | || || Sbjct 404871 GAGGTAGACAATGTTGTACGGCGTCACGCGTTCCGGGTAGGTGAGGATCATGGCAATACT 404930 Query 1818118 -CATAGGGCACGCCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGC 1818176 | | |||||||| |||| ||| | | || | |||||| | ||||||| || Sbjct 404931 GCGT--GGCACGCCGACCTGGTCGAGCTGGATGTTGGGGTCACCAGTAATGACGGTACGA 404988 Query 1818177 GCGGTAAAGTTGACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTG 1818236 |||| |||| ||| |||||||||||| || || || | | |||||||||||||||| Sbjct 404989 GCGGAGAAGTCGACACGCTTGCCCATGAGGTTTCCACGAAGACGGCCCTCCTTGCCCTTG 405048 Query 1818237 AACCGCTCCACG-AGGCCCTTGGTGGGCTTGCCCGACCGTTGGGTCGACTGCTTTTGGCC 1818295 | || | |||| | | ||||| ||| || ||| |||| | ||| ||| Sbjct 405049 AGACG-TGCACGAATGGCCTTGACGGGACGACCAGACTTTTGGAGAGCCTGGGGAATGCC 405107 Query 1818296 GCGGATGTCGTTGTTGTGGTAGGTGGCCACCTCGACCTGGAG 1818337 | ||||| |||| ||||||||| || | || |||||| Sbjct 405108 GGCAATGTCATTGTCCATGTAGGTGGCGACGTGGAACTGGAG 405149 >seq1 Length=4238441 Score = 114 bits (126), Expect = 2e-19 Identities = 137/183 (75%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 724961 CAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCAC 725020 ||||||| |||| ||||| | |||||||| ||||| ||||| |||| || |||| | Sbjct 3427738 CAACAAGGGCATGGCGATCCTCAACTCGTTCGTCAAGGACATTTTCGAGCGTATCGCCGT 3427797 Query 725021 CGAGGCCGGTC---GCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGAT 725077 |||||| ||| || | |||| | ||||||| |||||| | |||||||| Sbjct 3427798 CGAGGC--GTCCAAGCTCGCCGCG-TACAACAAGAAGGCCACGATTTCTAGCCGCGAGAT 3427854 Query 725078 CCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGG 725137 |||||||||||| || || ||||| | ||||| ||||||| ||||||| | || ||||| Sbjct 3427855 CCAGACCGCCGTCCGTCTCATCATCCCTGGCGAGCTGGCCAAGCACGCCATGTCTGAGGG 3427914 Query 725138 CAC 725140 ||| Sbjct 3427915 CAC 3427917 Score = 87.8 bits (96), Expect = 3e-11 Identities = 107/144 (74%), Gaps = 4/144 (3%) Strand=Plus/Plus Query 165750 GCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGC 165809 || ||||| |||| ||||| ||| |||| ||||||||||||||| ||| | ||||| Sbjct 3620580 GCCGACCTCATCACCTGGGGTGCCATCGGCGCGCGCACCACCGAGTCGCAGCTCCACCGT 3620639 Query 165810 GAGATGGCGTCGGCGCTGC--CGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCG 165867 ||| | || ||| | ||| || | ||||| |||||||| ||| ||||||||||| || Sbjct 3620640 GAGCTCGCCTCG--GGTGCCTCGTTCCCCATCGGCTTCAAGAACGGCACCGACGGCTCCG 3620697 Query 165868 TGGCGACGGCCCTCGATGCCGTGC 165891 | | ||| |||| ||| ||| Sbjct 3620698 TCTCTGTCGCCATCGACGCCATGC 3620721 >seq4 Length=3284570 Score = 89.7 bits (98), Expect = 7e-12 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 2133537 GCCCTCTTTGACGAGGCGTCGGACGAGATGGTGACGGTGCGCGATATTGACTTTTTCTCC 2133596 ||| | |||||||||| ||||||||||| | || ||||| |||||| ||| ||| Sbjct 2948124 GCCGTGTTTGACGAGGACCACGACGAGATGGTCATCGTCCGCGACATTGACATTTACTCG 2948183 Query 2133597 ATGTGCGAGCACCACCTGCTGCCCTTTATCGGCAAGGCCCACGTGGGCTACCTGCCC-GC 2133655 |||| ||||||||||| |||| || | |||||| | | | |||||| | ||| | Sbjct 2948184 CTGTGTGAGCACCACCTCGTGCCGTTCACGGGCAAGATCTCCATCGGCTACATCCCCAAC 2948243 Query 2133656 GGGCAAGATCATCGGTCTGAGCAAGATCCCGCGCATCGTCGACATGTTTTCCGACCGCTT 2133715 ||| | | | || || |||||| | |||| |||| || | |||| | ||| | Sbjct 2948244 AAGCACG-TGCTTGGCCTCAGCAAGCTGGCGCGTATCGCAGAGACGTTTGCGCGCCGTCT 2948302 Query 2133716 CCAAGTACAGGAGGCACTCACGCGCCAGATCGC 2133748 ||| || |||||| || || |||||| |||| Sbjct 2948303 CCAGGTCCAGGAGCGTCTTACCCGCCAGGTCGC 2948335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177808402896698