Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 5e-13 >seq6 Length=2185627 Score = 91.5 bits (100), Expect = 5e-13 Identities = 123/170 (72%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 443705 CGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCT 443764 |||||| || |||| ||||| | ||||| || | || || ||| ||| |||| Sbjct 94654 CGAGCGTCTTATCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTT-GCCT 94712 Query 443765 CCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGA 443824 ||||||||||| | || ||||| || || |||| |||||| ||||| ||||| || | Sbjct 94713 CCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCA 94772 Query 443825 TCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACC 443874 || || ||||||||| | || |||||| ||||| || |||| |||| Sbjct 94773 TCTCGCGCGACGAGGGTCTCCACACCGACTTTGCCTGCCTGCTCTTCACC 94822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335409833905