Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gamsii_20[genbank_20GCA_5F001600315.1_202016-03-01] 29 sequences; 24,609,388 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 4e-13 >seq6 Length=2185627 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/228 (70%), Gaps = 12/228 (5%) Strand=Plus/Minus Query 4568 ACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCT 4626 ||| ||||| | || | || || ||||| || || || | |||||||| | ||| | || Sbjct 94789 ACCCTCGTCGC-GCGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCGCGCT 94731 Query 4627 TTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAA 4686 | || ||||| || || | |||||| || || || ||||| ||||| || |||||||||| Sbjct 94730 TCTTGAGCCAGAAGATGGAGGCAAACGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCAA 94671 Query 4687 ACGCTACTAA-----TCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGC 4741 | || | ||| |||| | || ||||| | ||||| |||||| || | || Sbjct 94670 AGGCGA-TAAGACGCTCGGCAAACG-ACGAGTT---CTTGTCAGAAATCCAGTTGAGCGC 94616 Query 4742 CCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA 4789 ||||| || || ||||| | ||| ||||| | | || ||||| || Sbjct 94615 CCAGTCGGCCTTCTTCTTGATGCAGGGAATGTTCTCAATCGCGTTGAA 94568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049449064657