Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 5e-13 >seq4 Length=4180124 Score = 89.7 bits (98), Expect = 5e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 16184 AGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGT 16243 |||||| | || | ||||| || |||||| || || || ||||| | ||| || Sbjct 54846 AGGTGTGTGAAGAGGAGACAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGC 54905 Query 16244 TCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA 16303 |||||||| || || | || ||||| ||| || ||||| | |||||| |||| || Sbjct 54906 TCGTTGGAGAAGGTGAGTCCGGGCATGAGTCCACGCTTCTTGAGCCAGAAGATCGAGGCG 54965 Query 16304 AATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCG 16360 || || ||||| ||||| ||||||||||| | ||||| || || | || || ||| Sbjct 54966 AACGATCCCGAGAAGAAGATACCCTCAACGGCAGCAAAGGCAATGAGGCGCTCAGCG 55022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414291324440