Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=5948321 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/159 (73%), Gaps = 4/159 (3%) Strand=Plus/Minus Query 48570 CGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCT 48629 ||||||| |||||||| ||| || | || | ||||||||| || || | | |||| Sbjct 4244158 CGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGGGGGATGCCCTCCT 4244099 Query 48630 TGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGT 48687 ||||| || ||| ||||| | | || ||||| || | ||||||| ||||| || Sbjct 4244098 TGTCCTGGATCTTCGCCTTGACGTTGTCG--ATGGTGTCCGAAGACTCCACCTCGAGGGT 4244041 Query 48688 TATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || |||||||| || || || ||||||||||| Sbjct 4244040 GATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 4244002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251112722017