Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 1e-11 >seq4 Length=4180124 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | || | ||||||||| |||||| || || ||||| |||| Sbjct 22985 TACCACCACGAAGACGAAGGACAAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAG 22926 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || |||| || | || ||||| || || || || || || || || | || Sbjct 22925 AGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCCGGGG 22866 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||| || |||||| ||| || ||| || || | | || || | |||| Sbjct 22865 GGATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTGTCAATGGTGTCGGAAGACTCAA 22806 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | || || || || ||||||||||| || ||||| |||||||| Sbjct 22805 CCTCAAGAGTGATGGTCTTGCCCGTCAAGGTCTTGACGAAGATCTGCAT 22757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947130603127