Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 2e-11 >seq4 Length=4180124 Score = 84.2 bits (92), Expect = 2e-11 Identities = 120/169 (71%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 25033 CCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTG 25092 ||||||| | || || |||||||| ||||||||||| | ||| || ||| | Sbjct 23065 CCATCACTCTGGAGGTCGAGTCGTCCGACACTATCGACAACGTTAAGGCGAAGATCCAGG 23124 Query 25093 ACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAG 25152 |||| || || ||||| |||||||| ||||| | || ||||| ||||| || | || | Sbjct 23125 ACAAGGAGGGCATTCCCCCTGACCAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGG 23184 Query 25153 ATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201 ||| || || || ||| ||||| || || || || || ||||| || Sbjct 23185 ATGGACGTACCTTGTCCGACTACAACATCCAGAAGGAGTCGACGCTTCA 23233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327910219855