Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq4 82.4 6e-11 >seq4 Length=4180124 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| ||| || || || ||||| ||||| || | || |||| || | |||| Sbjct 22959 TGAAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCGTCCTCAAGCTGC 22900 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || || || || || ||||| || |||| ||| | |||||||||||| |||||| Sbjct 22899 TTTCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTC 22840 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || || | | | || || | ||| ||||| | || || || || |||||| Sbjct 22839 GCCTTGACGTTGTCAATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTCTTGCCCGTC 22780 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 || || || || || |||||||| Sbjct 22779 AAGGTCTTGACGAAGATCTGCAT 22757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937521074491