Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq4 327 1e-84 seq2 145 1e-29 seq1 129 8e-25 seq5 111 2e-19 >seq4 Length=4180124 Score = 327 bits (362), Expect = 1e-84 Identities = 816/1233 (66%), Gaps = 6/1233 (0%) Strand=Plus/Minus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 ||||| || || ||||| ||||| | || |||||||||||||| || || ||| | | Sbjct 3469684 CCCGAGGAGATCTCGTCCATGGTCCTCATCAAGATGAAGGAGACCGCCGAGGCTTACCTC 3469625 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 ||| ||| || | || || || || || || || ||||||| || || || || Sbjct 3469624 GGTGGAACCGTCTCCAAGGCCGTCGTCACCGTCCCCGCCTACTTCAACGACTCGCAGCGT 3469565 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAA 195811 ||||| || |||||||| | | || || ||||| || ||| | || ||||| || Sbjct 3469564 CAGGCCACCAAGGACGCCGGAACCATCGCTGGTCTCGACGTTCTCCGTATCATCAACGAG 3469505 Query 195812 CCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTA 195871 || || || || || || ||||| || || |||||||| || | || || || || Sbjct 3469504 CCCACCGCCGCCGCTATCGCTTACGGCCTCGACAAGAAGTCTGAGGGCGAGAAGAACGTT 3469445 Query 195872 TTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGT 195931 | ||||| || || ||||| || || || || || || || || | ||||| | || Sbjct 3469444 CTCATCTTCGACCTTGGTGGAGGAACCTTCGACGTTTCGCTCCTTACCATTGAGGAGGGC 3469385 Query 195932 ATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCA 195991 || ||||| || ||||| || |||||||| || || || |||||||| || || || Sbjct 3469384 ATCTTCGAGGTCAAGGCCACCGCTGGTGACACCCACCTTGGTGGTGAGGACTTTGACAAC 3469325 Query 195992 CGTCTTCTCCGTCA-TTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGG 196050 ||||| || || |||||| | |||||| || ||||| ||||| || | || || Sbjct 3469324 CGTCTCGTCAACCACTTTGTC-CAGGAGTTCAAGCGCAAGAACAAGAAGGACCTCTCCGG 3469266 Query 196051 AAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTC 196110 || || | || || ||||| || | || || ||||| ||||| || || || ||||| Sbjct 3469265 CAACGCTCGTGCCCTCCGTCGTCTCCGCACCGCCTGTGAGCGTGCTAAGCGCACCCTCTC 3469206 Query 196111 TTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATAC 196170 || | || || || | | |||||||| ||| | || ||||| || |||||||| || Sbjct 3469205 GTCGGCTGCCCAGACCTCGATCGAGATTGACTCGCTCTTCGACGGTATCGACTTCTACAC 3469146 Query 196171 AACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGA 196230 | || |||||||| ||||| || ||| | | || | || | ||||| Sbjct 3469145 CTCCATCACCCGTGCTCGTTTCGAGGAGCTCTGCCAGGACCTCTTCCGCTCCACCATGGA 3469086 Query 196231 ACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGT 196290 || ||||| | || || || ||| | ||||| || ||||| ||| | || ||||| Sbjct 3469085 GCCCGTTGAGAAGGTTCTCCGCGACTCGAAGATTGACAAGTCGTCGGTCAACGAGATTGT 3469026 Query 196291 CCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAA 196350 ||| || || || || |||||||| || ||||| || || | | || | | ||| Sbjct 3469025 CCTCGTCGGTGGCTCTACCCGTATCCCCAAGATCCAGAAGCTCGTCTCGGACATGTTCTC 3468966 Query 196351 TAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGT 196410 | || ||| | |||||||| || || || || || || ||||| ||||| Sbjct 3468965 TGGCCGTGAGCCCAACCGTTCCATCAACCCCGACGAGGCCGTCGCCTACGGTGCCGCCGT 3468906 Query 196411 TCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGT--CCAAGATCTTCTGCTACTT 196468 ||||| | || ||| |||| ||| | | | ||| || || || || || Sbjct 3468905 CCAGGCCTCCATCCTCAACGGTG-AGAC-CTCCGAGGCTACCCAGGACCTCCTCCTCCTC 3468848 Query 196469 GATGTTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATT 196528 || ||||| || | ||| ||||| | || || || |||||| | ||||| | || Sbjct 3468847 GACGTTGCCCCTCTCTCCATGGGTATCGAGACCGCTGGTGGTATCATGACCCCCCTCATC 3468788 Query 196529 GATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAAT 196588 | | ||||| ||| | || || |||||| | |||| || || || || || || Sbjct 3468787 AAGCGCAACACCACTGTCCCCACCAAGAAGTCGGAGATCTTCTCCACCTACTCGGACAAC 3468728 Query 196589 CAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCAT 196648 || || ||||| | || || || | ||| || || || || | ||||| | | Sbjct 3468727 CAGCCCGGTGTCCTCATCCAGGTCTTTGAGGGTGAGCGTGCCAAGACCAAGGACTGCAAC 3468668 Query 196649 CTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATT 196708 || || || | || || | |||| || || | || ||| | |||||||| ||||| Sbjct 3468667 CTCCTCGGCAAGTTTGAGCTCTCGGGCATCCCCCCCGCCCCCCGTGGTGTTCCCCAGATC 3468608 Query 196709 AATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCT 196768 | || | ||||| | ||||| || || || || ||||||| ||| |||||| | Sbjct 3468607 GAGGTCTCGTTCGACGTCGACGCCAACGGTATCCTCAACGTCAACGCTTCCGACAAGACC 3468548 Query 196769 TCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAA 196828 | ||||| || | |||| || ||||| |||||||| || || || |||||||| Sbjct 3468547 ACCGGCAAGTCCAACCAGATCACCATCACCAACGACAAGGGCCGTCTCTCCAAGGAGGAC 3468488 Query 196829 ATTGAACGTATGGTTCAAGATGCGGAAAAGTAC 196861 | || || ||||| || || || |||||| Sbjct 3468487 GTCGAGCGCATGGTCGCCGAGGCCGAGAAGTAC 3468455 Score = 196 bits (216), Expect = 6e-45 Identities = 183/233 (79%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || || || || || || || || ||||||||||| |||| Sbjct 22524 GTGGTATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATTACCCTCGAGGTCGAGT 22583 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| ||| |||| |||||||| || || ||||| |||||||| |||| Sbjct 22584 CTTCGGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCCG 22643 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || ||||| || || || || ||||| || ||||| || |||||| | || | Sbjct 22644 ACCAGCAGCGTCTTATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACT 22703 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| |||||||| || || ||||| ||||| | || || |||||| Sbjct 22704 ACAACATTCAGAAGGAGTCGACCCTTCACCTGGTTCTCCGTCTCCGTGGTGGT 22756 Score = 196 bits (216), Expect = 6e-45 Identities = 183/233 (79%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || ||| | || || || || ||||| || |||||||||| Sbjct 22752 GTGGTATGCAGATCTTCGTCAAGACCTTGACGGGCAAGACCATCACTCTTGAGGTTGAGT 22811 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| || || ||| |||| || |||||||| || ||||| ||||| || || | Sbjct 22812 CTTCCGACACCATTGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCCCCGG 22871 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || ||||| ||||| || |||||||| || || || |||||| |||| | Sbjct 22872 ACCAGCAGCGTCTCATTTTCGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCTCTGACT 22931 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | || |||||||| ||||| |||||||| || | ||||| |||||| Sbjct 22932 ACAACATCCAGAAGGAGTCCACTCTTCACCTTGTCCTTCGTCTTCGTGGTGGT 22984 Score = 170 bits (188), Expect = 3e-37 Identities = 162/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 171882 CCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAA 171941 ||| |||||||| || ||||| || ||||| |||||||| ||||| ||||| ||| | || Sbjct 23051 CCTCACTGGAAAGACCATCACTCTGGAGGTCGAGTCGTCCGACACTATCGACAACGTTAA 23110 Query 171942 AGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGG 172001 || ||||| || || ||||| |||||||| || || ||||| || || || |||||||| Sbjct 23111 GGCGAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCCTGATCTTTGCTGG 23170 Query 172002 TAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCT 172061 || ||||| || |||||||||||| | | || |||||| | || |||||||| || || Sbjct 23171 CAAGCAGCTCGAGGATGGACGTACCTTGTCCGACTACAACATCCAGAAGGAGTCGACGCT 23230 Query 172062 ACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||||||| || | || || ||||| Sbjct 23231 TCACCTTGTCCTCCGTCTCCGTGGTGG 23257 Score = 132 bits (146), Expect = 6e-26 Identities = 124/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 171882 CCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAA 171941 ||||||||| || || ||||| |||||||| ||||| || ||||| || || ||| |||| Sbjct 22250 CCTTACTGGCAAGACCATCACTCTCGAGGTCGAGTCCTCGGACACCATTGACAACGTCAA 22309 Query 171942 AGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGG 172001 |||||||| || || |||||||||||||| ||||| ||||| || || || || || || Sbjct 22310 GGCCAAGATCCAGGACAAGGAAGGCATTCCTCCCGACCAGCAGCGTCTCATCTTCGCCGG 22369 Query 172002 TAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 || ||||| || || || || ||||| | || |||| Sbjct 22370 CAAGCAGCTCGAGGACGGCCGCACCCTTTCCGACTACA 22407 >seq2 Length=4873547 Score = 145 bits (160), Expect = 1e-29 Identities = 400/609 (66%), Gaps = 8/609 (1%) Strand=Plus/Plus Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || || || | || || |||||||||| ||| ||||| Sbjct 2001469 GTCCCCGCCTACTTCAACGACTCGCAGCGTCTCGCTACCAAGGACGCTGGTGCCATTGCC 2001528 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || | || | || ||||| || || || || || || ||||| || ||||| Sbjct 2001529 GGCCTCGAGGTCCTCCGTATCATCAACGAGCCCACCGCCGCCGCCATTGCCTACGGTCTT 2001588 Query 195842 GACAAGAA---CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 ||| |||| |||||| || || || || | ||||| || ||||| ||||| || Sbjct 2001589 GACCAGAAGTCCAAGGAGGAG---AAGAACGTTCTCATCTTCGACCTCGGAGGTGGAACT 2001645 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 || |||||||| ||||| || |||||| | |||| || ||||||||||| ||| Sbjct 2001646 TTCGATGTCTCGCTTCTTTCGATCACTGGTGGTGTCTTCGCCGTCAAGGCTACTGCCGGT 2001705 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGA-TGCACGTCTTCTCCGTCATTTGTCTGATGA 196017 || || || || |||||||| || ||||| ||| || || || || | || Sbjct 2001706 GACACCCACCTTGGTGGTGAGGACTTCGACAACAC-CCTCCTTGAGCACTTCAAGGCCGA 2001764 Query 196018 GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAG 196077 |||| || ||||| ||| || || || | | | | ||||| ||||| || | Sbjct 2001765 GTTCAAGCGCAAGAACAAGCTTGACATCTCGGACGACGCCCGTGCTCTCCGTCGTCTCCG 2001824 Query 196078 GACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGAT 196137 | || ||||| |||||||| || || ||||| || | || || | || ||| | Sbjct 2001825 TTCCGCCTGTGAGCGTGCCAAGCGCACCCTCTCGTCGGTTACCCAGACCACCGTCGAGGT 2001884 Query 196138 TGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGA 196197 || ||| | | | || | ||||||| | | || |||||||| ||||| || || Sbjct 2001885 CGACTCGCTCTACCAGGGCACCGACTTCTCCGCCAACATCACCCGTGCCCGTTTCGAGGA 2001944 Query 196198 GTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGC 196257 | | ||| | | || | | | || || || || || | || || ||||| Sbjct 2001945 GATCAACGCCGTCGCTTTCAAGTCGACCATTGACCCCGTCGAGAAGGTCCTCAAGGACGC 2002004 Query 196258 AAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCC 196317 ||| | | ||||| || || ||||||||||| || || || |||||||| || Sbjct 2002005 CAAGTTCCCCGCCGCCAAGGTCGACGACATTGTCCTTGTTGGTGGCTCTACCCGTATCCC 2002064 Query 196318 GAAGATTCA 196326 ||||| || Sbjct 2002065 CAAGATCCA 2002073 >seq1 Length=5948321 Score = 129 bits (142), Expect = 8e-25 Identities = 128/166 (77%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 171874 GTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGAT 171933 || || ||||| || || || || |||||||||||||| ||||| || ||||| ||||| Sbjct 3541565 GTTAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACCATCGAC 3541624 Query 171934 AACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATT 171993 ||| |||| |||||||| || || ||||| ||||| || ||||| ||||| || || || Sbjct 3541625 AACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTCATC 3541684 Query 171994 TTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 || || || || ||||| || || || || ||||| | || |||| Sbjct 3541685 TTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACA 3541730 Score = 127 bits (140), Expect = 3e-24 Identities = 135/178 (76%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || ||||| || || || || |||||||||||||| ||||| || Sbjct 4244002 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCG 4244061 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| || ||||| || || ||||| ||||| || || || ||| Sbjct 4244062 GACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 4244121 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 || || || || || || || || ||||| || || || || ||||| | || |||| Sbjct 4244122 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACA 4244179 >seq5 Length=3690501 Score = 111 bits (122), Expect = 2e-19 Identities = 340/521 (65%), Gaps = 11/521 (2%) Strand=Plus/Minus Query 77966 ATGCGTGTTTCTATTGGTATTCATGGAAATGATATTCCAGCGGTACTTGAAACGTATGAT 78025 |||||||| || || ||||| || || | | ||| | ||| |||| || || | Sbjct 3210797 ATGCGTGTCTCGATCGGTATCCACGGCGAGAACATTGAAAAGGTCATTGAGACCTACAAC 3210738 Query 78026 AAAATGTCCAATGGTATGTTTATTCACGCAACACCTACTTTGTTTAATGCAGGTACTCCC 78085 ||||| | || |||| ||||| | ||||| | || || || ||||| ||| Sbjct 3210737 CTCATGTCGGAGCGTTACTTTACCCACGCCTCGCCTACCCTCTTCAACGCCGGTACCCCC 3210678 Query 78086 CGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAGGACTCTATTAATGGTATA 78145 | || |||||||| || || ||||| | || | ||||| ||||||||| | || || Sbjct 3210677 CACCCCCAGATGTCGTCGTGCTTCCTCGTCGCCATGAAGGACGACTCTATTGACGGCATC 3210618 Query 78146 TACGGGACTCTCACAGAG-TGTGCTCAGATTTCTAAGTGGGCTGGTGGTATAGGTCTTCA 78204 |||| ||||||| ||| || || ||||| || ||| || || ||||| ||||| || Sbjct 3210617 TACGACACTCTCA-AGACCTGCGCCCAGATCTCCAAGACTGCCGGCGGTATCGGTCTCCA 3210559 Query 78205 TATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAACTAATGGTCAGTCTGATGG 78264 || ||| | ||||||| || || ||| || || || || | ||| | || Sbjct 3210558 CATCCACAACATTCGTGCCAAGGGCTCGTACATTGCCGGCACCAACGGCTACTCTAACGG 3210499 Query 78265 AATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTATGTCAACCAAGCGGGTCG 78324 || | || ||||| | | | | | ||||| || || || ||| |||| |||| | Sbjct 3210498 TATCGTCCCCATGCTCCGTGCCTACGACGCTACTGCTCGTTACGTCGACCA---GGGTGG 3210442 Query 78325 TAGGAAGGG-----GT-CATTCGCTATGTACCTTGAACCTTGGCACGCCGATGTAATGGA 78378 || ||| | || | || || || ||||| || || |||||||||||||| | || Sbjct 3210441 TAACAAGCGCCCCGGTGCCTTTGCCATCTACCTCGAGCCCTGGCACGCCGATGTCTTCGA 3210382 Query 78379 TTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGATGCAGGGATTTATTCAC 78438 || | || || || ||||| || | ||||| | ||| | | || | ||| Sbjct 3210381 CTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTTCGCGCCCGTGACCTCTTCTA 3210322 Query 78439 TGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGG 78479 || | ||||| |||| || || |||| | | || |||| Sbjct 3210321 CGCCCTCTGGATCTCGGACCTCTTCATGAGGCGTGTCGAGG 3210281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862260204240