Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq3 143 3e-29 >seq3 Length=4554691 Score = 143 bits (158), Expect = 3e-29 Identities = 217/306 (71%), Gaps = 2/306 (1%) Strand=Plus/Plus Query 147198 GGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTA 147257 ||| || ||||||||| || || ||| | ||||||||||||||||| ||| | || Sbjct 2526075 GGGATTATTCTTAATCTTGTCAATCACCTCCGCGAGCTGGTCCACGCCCTGCCCCGCATA 2526134 Query 147258 GTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGG 147317 | | || ||| |||| ||||| || || | |||||||||||||||||| || Sbjct 2526135 ATCCGCGTCGGCATCCTTGTACGCTGCCCCGAAATGGCGCCACTGGAAGCCGTACACGGG 2526194 Query 147318 CCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTT-GAGAAACTCGGGGGACC 147376 ||||| ||||| | |||| | ||||| || | |||| ||||| || || Sbjct 2526195 CCCCAAATCGCCCTCGCGGCGGTGCCCCA-GCCCGACCTTGTCGAGATACTCGCGGCTCC 2526253 Query 147377 CGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCC 147436 ||| | || |||||||| ||| |||||||||| ||||| ||||||| | ||| Sbjct 2526254 CGTTGCCGGCCCAGATGTTCACGCCCTTGGCGGCGAGCTTGGCGCCGTCCGTGCATCCCG 2526313 Query 147437 GGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCA 147496 || ||||||||||||||||| | || || | | || ||||||||||||| ||||| Sbjct 2526314 AGACAAACCAGAGCAGCTCCTCGATGACGCCGCGCGTGAACACCCTCTTGGTGGACAGCA 2526373 Query 147497 GGGGGA 147502 | |||| Sbjct 2526374 GCGGGA 2526379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487876008800