Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 4e-14 >seq4 Length=4180124 Score = 95.1 bits (104), Expect = 4e-14 Identities = 126/174 (72%), Gaps = 1/174 (1%) Strand=Plus/Minus Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759 |||| ||||| || | || ||||||| || || || | || || ||| | | || Sbjct 55024 TTCGCTGAGCGCCTCATTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCT-CGGGATCGTT 54966 Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819 ||||| ||||||||| | || ||||||||||| |||| ||| || ||||| ||||| Sbjct 54965 CGCCTCGATCTTCTGGCTCAAGAAGCGTGGACTCATGCCCGGACTCACCTTCTCCAACGA 54906 Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACAC 443873 || ||| || ||||||||| | || |||||| |||||||| |||| ||| Sbjct 54905 GCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTTGCCTGTCTCCTCTTCAC 54852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335654040565