Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 5e-12 >seq3 Length=4554691 Score = 86.0 bits (94), Expect = 5e-12 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 ||||||| | ||||||||| |||||||| || |||| || ||||| | |||| | | Sbjct 2526164 CGAAATGGCGCCACTGGAAGCCGTACACGGGCCCCAAATCGCCCTCGCGGCGGTGCCCCA 2526223 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 || |||||| | | | || | | |||||| || ||||||| || || ||||| Sbjct 2526224 GCCCGACCTTGTCGAGATACTCGCGGCTCCCGTTGCCGGCCCAGATGTTCACGCCCTTGG 2526283 Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGG 30194 ||| ||||| | || ||| | || ||| ||||| ||||||||||| | |||| Sbjct 2526284 CGGCGAGCTTGGCGCCGTCCGTGCATCCCGAGACAAACCAGAGCAGCTCCTCGATGACGC 2526343 Query 30195 CCTTCCAAAAGACCCTCTTGGT 30216 | | || ||||||||||| Sbjct 2526344 CGCGCGTGAACACCCTCTTGGT 2526365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163115848062