Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20gracile_20[genbank_20GCA_5F001600335.1_202016-03-01] 17 sequences; 24,114,851 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq6 105 3e-18 >seq6 Length=833729 Score = 105 bits (116), Expect = 3e-18 Identities = 148/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 31076 GCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATACATGTCCGCCAGG 31135 |||| ||| | ||||| || ||||| || || || ||||| ||| || | || || | | Sbjct 506984 GCGACCTGCTTGGTGAGGCGCTCCTGGACCTGGAGACGGCGCGCAAACGTCTCGGCGATG 507043 Query 31136 CGGGACAGCTTGCTCAGGCCCACGATACGACC--GTTCGGAATGTAGCTGATCGTGACCG 31193 || | |||||| |||||| | | ||| | ||| |||||||||| |||| || | Sbjct 507044 CGCGCGAGCTTGGACAGGCCGAGCA--CGAGCTTGTTTGGAATGTAGCCAATCGAGATCT 507101 Query 31194 TGCCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGATGTCGCGCACCG 31253 ||||| || |||| | | ||| |||||||| | ||||||| | ||||||||||| Sbjct 507102 TGCCGGTGAACGGCACCATGTGGTGCTCGCACAGCGAGTAGACGTCAATGTCGCGCACAA 507161 Query 31254 TCACCATCTGGTCATGCTTCTCCGCA 31279 | ||||||| ||| || | ||| ||| Sbjct 507162 TGACCATCTCGTCGTGGTCCTCGGCA 507187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187289562190912