Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20laibachii_20[genbank_20GCA_5F001600735.1_202016-03-01] 26 sequences; 30,616,633 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq6 147 2e-30 >seq6 Length=2644601 Score = 147 bits (162), Expect = 2e-30 Identities = 279/408 (68%), Gaps = 2/408 (0%) Strand=Plus/Minus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 |||||||| | ||| || ||||| || ||||| | |||||||| || || ||| Sbjct 75643 CCCTCGTCGCGCGAGATGAGCTCGTTCGAGAATGTGAGTCCGGGCATGAGGCCACGCTTC 75584 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || || | |||||||||||| || ||||| || |||||||||| ||||| Sbjct 75583 TTGAGCCAGAAGATGGAGGCGAACGACCCCGAGAAGAAGATGCCCTCGACGGCAGCAAAG 75524 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164 || || | || |||||| ||| || | || || ||||| || |||| ||| Sbjct 75523 GCAATGAGACGCTCGGCGAACGACGACTGTTCGTCGGTGATCCAGCGGAGCGCCCAGTCG 75464 Query 17165 GCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGT 17224 || || | ||| ||||| || || || |||||||| || | | || | | Sbjct 75463 GCCTTCTTCTTAATGCAGGGAATAGTCTCGATGGCCTTGAAGAGGTACT-GGCGGCGGGC 75405 Query 17225 AG-GTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCAT 17283 || |||| || || || |||||||| || ||| | || ||||| ||||||||||| Sbjct 75404 AGTGTCGCGGATGTAGGTGTCGATGAGAAGCGAGTAGGTCTCCGAGTGGATGTTCTCCAT 75345 Query 17284 GGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCG 17343 ||||| || ||||| ||| ||| || || || || || || || |||| || Sbjct 75344 CATGATCTGGAAGCCGTAGAAGGTCTTGGCCTCTGCAATCTGGACCTCGCCGCAGAAGCG 75285 Query 17344 TTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || | || || ||||| ||||| ||||| |||||||||||| || Sbjct 75284 CTCGACGAGGTTCTCGTTGACGATTCCGTCCGACGCGGCGAAAAAGGC 75237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545431797680