Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20laibachii_20[genbank_20GCA_5F001600735.1_202016-03-01] 26 sequences; 30,616,633 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq9 114 2e-20 >seq9 Length=1756552 Score = 114 bits (126), Expect = 2e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 145640 TGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGG 145698 ||||| |||| || || ||||| ||| | || ||||||| ||| || || || | |||| Sbjct 1206166 TGAGCGTGGGGAACGGGCGGGG-CTCGCGCTCGAGCTGGACCTTGAGCGGGTCAATGTGG 1206108 Query 145699 TTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTG 145758 | | |||| ||||||||||| |||| | |||| || || ||| ||| ||| || Sbjct 1206107 TCGCGGTACACGTGCGCGTCGCCCATCTGGAGGATAAACTCGTGGGGTTCGGTGCCGGTA 1206048 Query 145759 AGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGC 145818 | || |||| ||||| ||| || || | ||| ||| |||||||| ||||| ||||| Sbjct 1206047 ATGTACGCGATCATGTGGGTGAGGAGCGCGTATGAGGCGATGTTGAACGGCACGCCCAGG 1205988 Query 145819 CCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCT 145858 |||| ||| | ||||||||||| ||||| ||||| Sbjct 1205987 CCCAGGTCGCAGCTGCGCTGGTACATGAGGCAGCTGAGCT 1205948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076608225040