Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20laibachii_20[genbank_20GCA_5F001600735.1_202016-03-01] 26 sequences; 30,616,633 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq9 120 3e-22 >seq9 Length=1756552 Score = 120 bits (132), Expect = 3e-22 Identities = 190/270 (70%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 21237 AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAA 21296 |||||||| || ||||| ||| ||||| | |||||||| | ||||||| || ||||| Sbjct 1205686 AGCTGGTCGACGCCCTGGCCCGAGTAGTCGTCGTCGGCCGTCTTGTACTCTGCGCCAAAG 1205627 Query 21297 TGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGCCC 21356 || | ||| ||||| ||||| || || || || |||||||||||||||| | | || || Sbjct 1205626 TGGCGCCATTGGAAGCCGTAGACTGGTCCGAGGTCGCCCTCGCGGCGGTGCGAG-AGGCC 1205568 Query 21357 TGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCCGCGGCGCGA 21415 ||| | | | | ||||| |||| ||||||| || | ||||| ||| || Sbjct 1205567 GACGCGGTCGAGGTACTCGCGGCTGCCGTTGCCGTCCCAGATGTGCACGCCACGGGCCGC 1205508 Query 21416 CAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCCCCT 21475 || | || | ||||||| |||| || | ||||| || | |||||| | ||||| | Sbjct 1205507 GAGCTTGGCGCCGTCGGTGCAGCCGCTCACGAACCAGAGGAGCTCCTCGATCACGCCGCG 1205448 Query 21476 CCAAAACACCCTTTTGGTGGTTAACAGAGG 21505 | || || | || ||||| || ||||| Sbjct 1205447 CGTGAAGACGCGCTTCGTGGTCAAAAGAGG 1205418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775864448480