Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20laibachii_20[genbank_20GCA_5F001600735.1_202016-03-01] 26 sequences; 30,616,633 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq5 111 1e-19 >seq5 Length=2819049 Score = 111 bits (122), Expect = 1e-19 Identities = 112/143 (78%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 33575 AGATGGGCGACAAGTTTGCATCG-TTCACGGCCCAGAAGGGCACGTGCGGCATGATGTAC 33633 |||| |||||||||||||| ||| |||||| |||||||| || || || | |||| Sbjct 1849291 AGATTGGCGACAAGTTTGCGTCGCGTCACGG-ACAGAAGGGTACCATTGGTATCACGTAC 1849349 Query 33634 GACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCG 33693 |||| ||||||||||||||||||||| ||| | || |||||| | ||||||||||| Sbjct 1849350 CGCCAGGAGGACATGCCGTTCACGGCCGAGGGCATTGTGCCGGACATTATCATCAACCCG 1849409 Query 33694 CATGCGTTCCCCTCGCGCATGAC 33716 || || | || ||||| ||||| Sbjct 1849410 CACGCCATTCCGTCGCGTATGAC 1849432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233487118478