Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20laibachii_20[genbank_20GCA_5F001600735.1_202016-03-01] 26 sequences; 30,616,633 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq4 84.2 2e-11 >seq4 Length=3045899 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/159 (72%), Gaps = 4/159 (3%) Strand=Plus/Minus Query 48570 CGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCT 48629 ||||||| |||||||| ||| || | || | ||||||||| || || | | |||| Sbjct 1996767 CGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGGGGGATGCCCTCCT 1996708 Query 48630 TGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGT 48687 ||||| || ||| ||||| | | || ||||| || | |||||| ||||| || Sbjct 1996707 TGTCCTGGATCTTCGCCTTGACGTTGTCG--ATGGTGTCCGAAGACTCGACCTCGAGGGT 1996650 Query 48688 TATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || |||||||| || || || ||||||||||| Sbjct 1996649 GATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 1996611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251066516026