Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20laibachii_20[genbank_20GCA_5F001600735.1_202016-03-01] 26 sequences; 30,616,633 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 4e-12 >seq1 Length=5305799 Score = 87.8 bits (96), Expect = 4e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 243586 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAA 243645 ||| | |||||||| || || || ||||||||| | || | ||||| || || || || Sbjct 776099 ATGTGCCAGTACATGGAGTTTGTCGCCGACCGCCTCGTCGTGGCGCTCGGCTACGATAAG 776040 Query 243646 GTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACT 243705 | || ||| | | |||||| || | || ||||||||||| || || ||||| || | Sbjct 776039 ATCTATAACGCGACGAACCCGTTCGACTGGATGGAGCTCATCTCTCTGCAAGGCAAGGCC 775980 Query 243706 AACTTCTTCGAAAAGCGTGTCAG 243728 ||||| |||||| ||| ||||| Sbjct 775979 AACTTTTTCGAATCGCGCGTCAG 775957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879632603100