Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20laibachii_20[genbank_20GCA_5F001600735.1_202016-03-01] 26 sequences; 30,616,633 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq6 105 4e-17 >seq6 Length=2644601 Score = 105 bits (116), Expect = 4e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || || || |||||| || || || || || |||| ||||| Sbjct 27610 ACGAAGACGGAGGACGAGGTGGAGTGTAGACTCCTTCTGAATGTTGTAGTCAGAAAGAGT 27551 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || || |||||||| ||||| ||||| || || || ||||| || || || Sbjct 27550 GCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATAAGGCGCTGCTGGTCAGGGGGGATGCC 27491 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||| || ||||| ||||| ||||| || || | | | | |||| Sbjct 27490 CTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCAATGGTGTCCGACGACTCGA-CCTCAA 27432 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| || || || ||||| |||||||| |||||||| || Sbjct 27431 GGGTGATGGTCTTGCCGGTCAGAGTCTTGACGAAAATCTG 27392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178084733848