Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20laibachii_20[genbank_20GCA_5F001600735.1_202016-03-01] 26 sequences; 30,616,633 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 2e-11 >seq6 Length=2644601 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || ||||| || || || || || || || || | | Sbjct 27389 ATGCAGATTTTCGTCAAGACTCTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCG 27448 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 27449 GACACCATTGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 27508 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||||||||| || ||||| |||||| | | | || || || ||| Sbjct 27509 CAGCGCCTTATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGCACTCTTTCTGACTACAAC 27568 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| ||||| || ||||| ||| Sbjct 27569 ATTCAGAAGGAGTCTACACTCCAC 27592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897453783280