Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20laibachii_20[genbank_20GCA_5F001600735.1_202016-03-01] 26 sequences; 30,616,633 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq6 111 2e-19 >seq6 Length=2644601 Score = 111 bits (122), Expect = 2e-19 Identities = 148/205 (72%), Gaps = 7/205 (3%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || |||||||| |||||||| || ||||| || |||||||| || || | ||| Sbjct 75622 TCGTTCGAGAATGTGAGTCCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCG 75563 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA- 48301 || || || || ||||| ||||| || ||||| ||||| || | || | ||| || | Sbjct 75562 AACGACCCCGAGAAGAAGATGCCCTCGACGGCAGCAAAGGCAATGAGACGCTCGGCGAAC 75503 Query 48302 ----ACTGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAG 48357 |||| ||||| | ||||| || | ||||| || ||||||||||| | || | Sbjct 75502 GACGACTG--TTCGTCGGTGATCCAGCGGAGCGCCCAGTCGGCCTTCTTCTTAATGCAGG 75445 Query 48358 GCATTGTTTCTATAGCATTAAAGAG 48382 | || || || || || || ||||| Sbjct 75444 GAATAGTCTCGATGGCCTTGAAGAG 75420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668574232640