Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20montevideense_20[genbank_20GCA_5F001598995.1_202016- 03-01] 61 sequences; 24,872,216 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 5e-12 >seq7 Length=1425097 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||||||| |||||| || |||||||| || | | || |||| || |||||| Sbjct 29963 TGAAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGACCGTCTTCAAGCTGC 29904 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| | | || | ||||||||| || || | | ||||||||| ||| ||| Sbjct 29903 TTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTC 29844 Query 48644 TGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 ||| | | | || || || |||| ||||| ||||| || ||||| || || | Sbjct 29843 GCCTTCACGTTGTCGATA--GTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAG 29786 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 ||||||| || || ||||||||||| Sbjct 29785 TGAGAGTCTTGACGAAAATCTGCAT 29761 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 |||||| || |||||| || ||||| || || | | || ||||||| ||||| Sbjct 29736 ATGAAGGGTCGACTCCTTCTGGATGTTATAGTCCGAGAGGGTACGACCGTCCTCGAGCTG 29677 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| | | || | ||||||||| || ||| | | ||||||||| ||| || Sbjct 29676 CTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTT 29617 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 ||||| | | || ||||| || | |||||| ||| | || ||||| || || Sbjct 29616 GGCCTTGACGTTGTCG--ATGGTGTCCGAAGACTCGACCTCAAGGGTGATGGTCTTGCCA 29559 Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||||| || || ||||||||||| Sbjct 29558 GTGAGAGTCTTGACGAAAATCTGCAT 29533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250886826061