Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20montevideense_20[genbank_20GCA_5F001598995.1_202016- 03-01] 61 sequences; 24,872,216 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2 111 2e-20 seq1 105 1e-18 >seq2 Length=3077766 Score = 111 bits (122), Expect = 2e-20 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || |||||||| || ||||||||||| |||||||| ||||| || |||||||| Sbjct 1846835 TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTATCCGCCGTCTCGCCCGTCGTGG 1846776 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| ||||||||| | || || | |||| || |||| |||| |||| | |||| ||| Sbjct 1846775 TGGTGTCAAGCGTATTTCCGGCCTCATCTACGAGGAGACCCGTGGTGTTCTCAAGACCTT 1846716 Query 16573 C 16573 | Sbjct 1846715 C 1846715 >seq1 Length=3521688 Score = 105 bits (116), Expect = 1e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || |||||||| || ||||||||||| |||||||| ||||| || |||||||| Sbjct 2782846 TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTATCCGCCGTCTCGCCCGTCGTGG 2782905 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| ||||||||| | || || | |||| || |||| |||| ||| | |||| ||| Sbjct 2782906 TGGTGTCAAGCGTATTTCCGGCCTCATCTACGAGGAGACCCGTGGTGTCCTCAAGACCTT 2782965 Query 16573 C 16573 | Sbjct 2782966 C 2782966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075144227273