Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apiotrichum_20montevideense_20[genbank_20GCA_5F001598995.1_202016-
03-01] 61 sequences; 24,872,216 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq7 98.7 8e-16
>seq7
Length=1425097
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || | || || | |||| ||| |||||||| || |||||||||||||
Sbjct 30215 CCTCCACGAAGACGAAGGACAAGGTGCAACGTCGACTCCTTCTGAATGTTGTAGTCGGAA 30156
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | ||||||| | || |||||||| | || || ||||| ||||| ||
Sbjct 30155 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGGGGA 30096
Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888
| |||||| ||||| || | | |||||| | | | | ||||||| | ||| |
Sbjct 30095 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATAGTGTCGGACGACTCAACT 30036
Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| | ||||| || || || || || || ||||| |||||||||||
Sbjct 30035 TCAAGAGTGATAGTCTTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 29989
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || ||||||||||| | | ||| |||| || | ||
Sbjct 29963 TGAAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGACCGTCTTCAAGCTGC 29904
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| ||| | || || ||||| ||||| || | |||||| ||||| ||| | |
Sbjct 29903 TTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTC 29844
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||| | | | | ||||||| | ||| || | ||||||||| || || ||
Sbjct 29843 GCCTTCACGTTGTCGATAGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTG 29784
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
|| || ||||| |||||||||||
Sbjct 29783 AGAGTCTTGACGAAAATCTGCAT 29761
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087698842390
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |