Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20montevideense_20[genbank_20GCA_5F001598995.1_202016- 03-01] 61 sequences; 24,872,216 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq7 87.8 2e-12 >seq7 Length=1425097 Score = 87.8 bits (96), Expect = 2e-12 Identities = 210/318 (66%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || ||||||||||| || | ||| ||||| || || || | ||| ||| ||| || | Sbjct 37515 CAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAAGTGAGG 37456 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | || || || ||||||||||| || || || ||||| ||||| ||||| Sbjct 37455 CCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAAAAG 37396 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG 93271 ||||| || ||||| || || || | | || || ||||| | | | | Sbjct 37395 ATACCCTCGACGGCGGCGAACGCAATGAGGCGCTCAGCAAAGGACGAGCGCTCGTCGGAA 37336 Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331 ||||| | ||||| ||||| || ||||| || || || | || ||||| || || Sbjct 37335 ATCCAACGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGCCTTG 37276 Query 93332 AATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391 || ||||| | || | | || || ||||| || ||||| | ||||| || | Sbjct 37275 AAGAGGTACTGCCGGCGGGCGTTGTCACGAATGTAGGTGTCGATGAGGAGAGAGTAGGTC 37216 Query 93392 TCAGAATGGACATTCTCC 93409 || || || | |||||| Sbjct 37215 TCGGAGTGAATGTTCTCC 37198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860375393640