Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20montevideense_20[genbank_20GCA_5F001598995.1_202016- 03-01] 61 sequences; 24,872,216 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq6 212 7e-50 seq8 125 8e-24 seq7 102 1e-16 >seq6 Length=1458149 Score = 212 bits (234), Expect = 7e-50 Identities = 678/1039 (65%), Gaps = 27/1039 (3%) Strand=Plus/Minus Query 106280 TCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCA 106339 || || ||||| || ||||| | ||| | || | || ||||| || || ||| || Sbjct 935607 TCGGCAAGACCCTGGACACCGAGACCGACGGGGCGATGGCGCATGTTCGAGTTTTTGGCC 935548 Query 106340 GTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTT 106399 || |||||| || | || | ||||| | || || || |||||||| | ||| Sbjct 935547 TCCTGAACGGGGTAGTAGTTGCGCGAGATGACGCAGTCAAGGTTCTTGGTAACGACCTTG 935488 Query 106400 GTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCA---TTGACATACTTT 106456 ||||| || ||||| || | | ||| | |||| | | |||| | ||| || Sbjct 935487 GTGATCTCGTGAAGCTTCTTGAAGTCATAGGTGC---TGTTTTCAAAGTCGACGAACGCG 935431 Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 |||||||| || || || | ||||| || || ||| || | | |||||| | Sbjct 935430 GGAAGGGCAATGGAGGCAAGGTTGCAGACGGCAACCTCGTCGGGAGAAGAGTACTCGATG 935371 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || || | |||||| ||| || || |||| | || |||||| ||| | Sbjct 935370 ATCTCAGTGCAGAGGTTGGACGACTTGATAGTGCCCAGGTGCTGCTGGTTAGACTTGCGG 935311 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||| || ||||||||||| ||| |||| || ||||| ||||| | || || || Sbjct 935310 TTGGCAGCGTCCTTGTAGAGGATGAAGGGGCCACCAGTCTCGGTCTGGGCCTCAAGGATG 935251 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGG--CCCGT-CCCTCCGCCTCGTA 106692 || ||| | | || | | || | |||| ||| ||| | ||||| |||||| Sbjct 935250 GCGAACCAGAGCTTCTGGGCCTTG----ATGGTCTTGCGACCCTTGCCCTCACGCTCGTA 935195 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCG--CGTCGGAGAGACCTGGTGCCTTG 106750 ||| ||| |||| ||||||||||| | | | |||||| ||||| || || | Sbjct 935194 CTTCTGGTACAGGGTCTCAAACTCCTC--CGAGTGAACGTCGGCAAGACCAGGGCACTCG 935137 Query 106751 TCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGA 106810 | || || | || | ||| | ||| | |||| || ||||||||||| ||||| || Sbjct 935136 GCGGGGCACATGAGGGTCCAGTCACCGTCGGCCTCGACACGCTTCATGAAGAGGTCAGGG 935077 Query 106811 ATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 106870 | ||| || | | || || || | ||| |||| || | || ||||| || Sbjct 935076 ACCCAGAGAGCGTAGAACAGGTCACGCGCGCGAACCTCCTCCTTTCCGTGGTTCTTGCGG 935017 Query 106871 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC- 106929 | |||||||| || | | ||||| ||||| |||||||| |||| || | | || Sbjct 935016 AGGTCAAGGAAGTCGAAAACGTCCGCATGCCAGGGCTCAAGGTAGATGGCAAAGGCACCA 934957 Query 106930 ---CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 106986 | | | ||| | | || | || || || || || |||| | | || ||||| Sbjct 934956 GGGCGCTTGTTGCC-ACCCTGGTCGACGTAACGGGCGGTCGCGTCGTAGGCACGGAGCAT 934898 Query 106987 TGGAATAATACCATCTGATTGACCATTTGTCCCC-CGAA-TACGAGATTTATTGGCTCTC 107044 || | |||||| | || | ||| || || || ||| |||||| | |||| | Sbjct 934897 GGGGACAATACCGTTGGAGTAACCGTTGGTTCCGGCGATGTACGAGCCCT--TGGCACGA 934840 Query 107045 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 107104 | | || ||||| | ||||| || ||||| ||| ||||| || || || | | Sbjct 934839 ATGTTGTGAATGTGGAGACCAATGCCACCAGCAGTCTTGGAGATCTGGGCGCAGGTCTTG 934780 Query 107105 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 107164 || || | ||||| |||| ||| ||||| ||||| | |||| |||||||| ||| Sbjct 934779 AGGGTGTCGTAGATGCCGTCGATCGAGTCGTCCTTCATAGCGACGAGGAAGCACGACGAC 934720 Query 107165 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 107224 ||||| || || |||||||| ||||||||||| || | |||||| |||| | Sbjct 934719 ATCTGAGGGTGGGGAGTACCAGCGTTGAAGAGGGTCGGGGAAGCGTGAGTGAAGTAGCGC 934660 Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284 | |||||| || ||| ||||| | ||| || |||| || |||||||| |||||| Sbjct 934659 TCGGACATGAGGTTGTACGTCTCAATGACCTTGTCGATGTTGTCACCGTGGATACCGATG 934600 Query 107285 GCCACACGCATAAACATGT 107303 | |||||||||| ||||| Sbjct 934599 GAAACACGCATAATCATGT 934581 >seq8 Length=1386445 Score = 125 bits (138), Expect = 8e-24 Identities = 198/277 (71%), Gaps = 14/277 (5%) Strand=Plus/Plus Query 117144 GTTCATACCGATGAGATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAAC 117203 ||| |||||||| || ||||||||| ||||| | |||| | ||||| || ||||| Sbjct 724962 GTTGATACCGATAAGCGCACATGGGAGCGCGTCTGTCAGGAACTCCTTCTCTATTTCAAC 725021 Query 117204 CGCCTCTTTCACGATGGCGTGGATAGTTTCGGTAGTG----GGTCTATTACGCAAAGTC- 117258 ||| || ||||||||| || || ||| || | ||| | | | | | Sbjct 725022 CGCTTCGGTCACGATGGTGTAGACTTCCTCGTCAGAGCAGCGGTGCTTGAG---ATGCCC 725078 Query 117259 -TTGAAGAGCTCCACGGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATT 117317 | || ||| |||| |||| || ||| | |||||||||||| || ||||| ||||| Sbjct 725079 ATAGAGGAGG--CACG-CAAAGTCGGTGTGAATACCCTCATCTCGAGAGATAAGCTCATT 725135 Query 117318 TGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATG 117376 ||||| ||||| |||||||||| |||||||| | ||| | || || ||| |||| Sbjct 725136 CGAGAATGTAAGGCCACGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGCAGCA-AATG 725194 Query 117377 ACCCGGAGAAGAAGATACCCTCCACACACGCAAACGC 117413 | || ||||||||||| ||||||||||||||||| || Sbjct 725195 ATCCCGAGAAGAAGATGCCCTCCACACACGCAAAGGC 725231 >seq7 Length=1425097 Score = 102 bits (112), Expect = 1e-16 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || |||||||||||| || || || || || || || ||||| ||||| Sbjct 37513 GGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTGGAGAAAGTGAGGCC 37454 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 |||||||| || |||||||| | ||| | || | | || || || ||||| ||||| Sbjct 37453 GGGCATGAGGCCACGCTTCTTGAGCCAGAAGATCGAGGCAAACGAGCCAGAGAAAAAGAT 37394 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451 |||||| || || ||||||| |||||||| || ||||| |||| | || | || Sbjct 37393 ACCCTCGACGGCGGCGAACGCAATGAGGCGCTCAGCAAAGGA-CGAGCGCTCGTCGGAAA 37335 Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 ||| | ||||| | |||||||||| || || || | || | |||||| Sbjct 37334 TCCAACGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCGATGGC 37280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980350139640