Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20montevideense_20[genbank_20GCA_5F001598995.1_202016- 03-01] 61 sequences; 24,872,216 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq6 286 6e-72 seq7 221 2e-52 seq8 91.5 3e-13 >seq6 Length=1458149 Score = 286 bits (316), Expect = 6e-72 Identities = 944/1456 (65%), Gaps = 45/1456 (3%) Strand=Plus/Minus Query 212687 CAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTC 212746 ||| || | ||| || ||||| |||||| || || | | | ||||||||| | ||| Sbjct 936214 CAGGTGGATGTTGAGCGACTGCGACTGGTCGATAAAGGCACCACGGTCAGCGGCAAGGTC 936155 Query 212747 TATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGG 212806 || | || |||| || | |||||| || |||||| |||| |||| || || || Sbjct 936154 GATAACTGCTTTCTGCGAAATCTCCCAGACAGTCTTGTAGATCGACTTGATCTCATCGGG 936095 Query 212807 GAAGCCGGGGATGTTCTGCACAGACCC-CCTGTGT--ATGGTCAGCTGCAGGCGCATGTC 212863 | || || |||| ||| | || || || | | ||| |||||| ||||| Sbjct 936094 AATTCCAGGAATGTGCTGGATCGAACCACCAGAGGCGATGACGAGCTGCTT---CATGTT 936038 Query 212864 CTCGTTCCAGAGGCCCCTGGTCTCCAGG-CACTTGACCAGGTGAGGGTTGACTATCTGGA 212922 || | ||||||| | | | ||| ||| || || ||| ||| | ||||| Sbjct 936037 GTCATCCCAGAGGTCGAGGTTGATGAGGTCACG-GAGGAGCCAGGGGCAGACGACCTGGA 935979 Query 212923 AGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGT 212982 ||||||| || ||||| | | ||| | | || ||||||||||||| || ||||| Sbjct 935978 AGTCACCCGAAAGCACACGGCGGGAGTAGAGCATCGAGGTGTAGGGCTCGAAGCACTCGT 935919 Query 212983 TGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCC 213042 | || |||||||| | ||| || || ||||| || || || || || ||| | Sbjct 935918 TCCAGCCAAGAATCTGAGAGGTGGAAGCAGTAGGCATAGGTGCGACGAGAAGCGAGTTGC 935859 Query 213043 TCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGT 213102 || |||| || | |||| || ||||| |||||| ||| | | | || Sbjct 935858 GAACACCGTTCTTGGCGATCTTCTCACGGAGCTCGTCCCAGTTCCAGAGGTCGGTGGGGA 935799 Query 213103 CCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCT 213162 || || ||| | ||||||||| | |||| | | ||| |||| Sbjct 935798 TA-CGGCC--------CCAAAGGTCAAACTGAAGCTTGCCCTGCGAGATGGGCGAACCCT 935748 Query 213163 GGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGT 213222 ||| || | ||||| ||| ||||| ||||| ||| || ||||||| || ||||||| Sbjct 935747 CGTATGAAGGGTAGGTTCCAACCTCCTGGGCCATCTCACACGACGCCTCGAGAGCAGCGT 935688 Query 213223 AGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCA 213282 ||||||||| || || |||| |||||||| || | || || |||||||| Sbjct 935687 GGTAGATGGTCTCGAAGATCTGGAGGTTGAGCTGGCGAGCGGCGGGCGAGTCGAAGGGCA 935628 Query 213283 TCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTC 213342 | | | ||| | || || || |||||||| |||| |||| ||| | || | Sbjct 935627 TGCGGAGGGCCATGAAGGCGTCGGCAAGACCCTGGACACCGAGACCGACGGGGCGATGGC 935568 Query 213343 TCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGA 213402 || ||| || || | ||||| | |||||| |||||| ||||| || | Sbjct 935567 GCATGTTCGAGTTTTTGGCCTCCTGAACGGGGTAGTAGTTGCGCGAGATGACGCAGTCAA 935508 Query 213403 GGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCC 213462 |||| ||| | || ||||||| | | || | || |||| | ||| | Sbjct 935507 GGTTCTTGGTAACGACCTTGGTGATCTCGTGAAGCTTCT------TGAAGTCATAGGTGC 935454 Query 213463 CGTCCTGCA------CAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCT 213516 || | | | ||| | || ||||| ||| ||| |||||||| ||||| |||| Sbjct 935453 TGTTTTCAAAGTCGACGAACGCGGGAAGGGCAATGGAGGCAAGGTTGCAGACGGCAACCT 935394 Query 213517 CCT-GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCC 213575 | | | ||| | |||||| |||||||| ||||| |||||| | ||| |||||| Sbjct 935393 CGTCGGGAGAA-GAGTACTCGATGATCTCAGTGCAGAGGTTGGACGACTTGATAGTGCCC 935335 Query 213576 AGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCG 213635 |||| ||| ||||| ||||| |||||||| ||||||||||| ||| ||||| || Sbjct 935334 AGGTGCTGCTGGTTAGACTTGCGGTTGGCAGCGTCCTTGTAGAGGATGAAGGGGCCACCA 935275 Query 213636 GTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTG 213695 ||||| ||||| | | || || | |||||| | | |||||||| | || Sbjct 935274 GTCTCGGTCTGGGCCTCAAGGATGGCGAACCAGAGCTTCTGGGCCTTGATG----GTCTT 935219 Query 213696 ACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAG-- 213752 | | | | | | | |||||||| | ||| || | || || | || || Sbjct 935218 GCGACCCTTGCCCTCACGCTCGTACTTCTGGTACAGGGTCTCAAACTCCT---CCGAGTG 935162 Query 213753 -ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCT 213811 || | | || || || || ||||| ||||||||| ||||||| ||||| | Sbjct 935161 AACGTCGGCAAGACCAGGGCACTCGGCGGGGCACATGAGGGTCCAGTCACCGTCGGCCTC 935102 Query 213812 GACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCT 213871 ||| | || |||||| ||||| |||||||| || ||| ||||||||| | | | Sbjct 935101 GACACGCTTCATGAAGAGGTCAGGGACCCAGAGAGCGTAGAACAGGTCACGCGCGCGAAC 935042 Query 213872 CTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGG 213931 ||| ||| ||| ||| ||||| || || || ||||| || | |||||| ||||| || Sbjct 935041 CTCCTCCTTTCCGTGGTTCTTGCGGAGGTCAAGGAAGTCGAAAACGTCCGCATGCCAGGG 934982 Query 213932 CTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGC 213988 ||| | ||||||||||||||| || | || | ||||| |||||||| || | ||| Sbjct 934981 CTCAAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTGCCACCCTGGTCGACGTAACGGGC 934922 Query 213989 CACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGC 214048 | || | || || || | ||| || | |||||||| | ||||||||||| || Sbjct 934921 GGTCGCGTCGTAGGCACGGAGCATGGGGACAATACCGTTGGAGTAACCGTTGGTTCCGGC 934862 Query 214049 TATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTT 214108 || |||||||| ||| | | |||| ||| ||| || |||||||| || ||| Sbjct 934861 GATGTACGAGCCCTTGGCACGAATGTTGTGAATGTGGAGACCAATGCCACCAGCAGTCTT 934802 Query 214109 GGAGATCATGGCGCAG 214124 ||||||| ||||||| Sbjct 934801 GGAGATCTGGGCGCAG 934786 >seq7 Length=1425097 Score = 221 bits (244), Expect = 2e-52 Identities = 361/517 (70%), Gaps = 5/517 (1%) Strand=Plus/Minus Query 47860 CTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGGG 47919 ||| |||||||| | ||| || | || ||||| ||||||| ||| |||||| || | Sbjct 37783 CTCGAAGAAGTTGGCCTTGCCTTGCAGAGAGATCATCTCCATAAAGTCGAAGGGATTCGT 37724 Query 47920 TGTGTTATACACCCGTGTCAGGCCCATCTGTTCC-AGCAGGTGATCCGCGACGTACTCGA 47978 | ||| || | | |||| ||| | | ||||| | || |||||| |||| | Sbjct 37723 CGAGTTGTAGATCT-TGTCGTTGCCAAGAGCGACGAGCAGACGGTCGGCGACGAACTCAA 37665 Query 47979 TGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGTGA 48038 |||||| ||||||| | |||||| || ||||| |||||||| | |||| || | Sbjct 37664 TGTATTGGCACATGAGACCGGCGTTCATACCGATGAGCGACACGGGGAGCGCCTCGGTAA 37605 Query 48039 GAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGG 48098 | ||||||| || |||| ||||| || | | ||||| || || | || | | | Sbjct 37604 GGAACTCCTGTTCAATCTTGACGGCCTCGCGGATAATCTTCTCAATGAGG---TTGGGGT 37548 Query 48099 GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGT 48158 | | || || | | || | |||| ||||||||||| |||| | || |||| Sbjct 37547 GCGGGCGACGGCGGAGATGGGTGAAAAGCAGACAGGCAAAGTCGGTGTGGAGACCCTCGT 37488 Query 48159 CCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCC 48218 | || ||||||| |||||||||| ||| || ||||||| || | || ||||||| Sbjct 37487 CACGCGAGATGAGCTCGTTGGAGAAAGTGAGGCCGGGCATGAGGCCACGCTTCTTGAGCC 37428 Query 48219 AGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGA 48278 |||| || | || || ||||||||||| ||||| ||||| || || |||||||| ||| Sbjct 37427 AGAAGATCGAGGCAAACGAGCCAGAGAAAAAGATACCCTCGACGGCGGCGAACGCAATGA 37368 Query 48279 GCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCT 48338 | | ||| | || || | | || ||| || ||||| || |||||||| ||||||| Sbjct 37367 GGCGCTCAGCAAAGGACGAGCGCTCGTCGGAAATCCAACGGAGGGCCCAGTCGGCCTTCT 37308 Query 48339 TCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375 |||||||||| || || ||||| |||||| |||||| Sbjct 37307 TCTTGATGCAGGGGATGGTCTCGATGGCCTTGAAGAG 37271 >seq8 Length=1386445 Score = 91.5 bits (100), Expect = 3e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 48120 CATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGG 48179 ||||||| | ||| |||||||| |||| | || || || || ||| ||| | || | Sbjct 725078 CATAGAGGAGGCACGCAAAGTCGGTGTGAATACCCTCATCTCGAGAGATAAGCTCATTCG 725137 Query 48180 AGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGC 48239 |||| || ||| |||||| || | || ||||||||||| || || || || || | Sbjct 725138 AGAATGTAAGGCCACGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGCAGCAAATGATC 725197 Query 48240 CAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCT 48282 | |||||||||||||||||||| ||| || ||| | || || Sbjct 725198 CCGAGAAGAAGATGCCCTCCACACACGCAAAGGCGATCAGTCT 725240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532089706240