Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20montevideense_20[genbank_20GCA_5F001598995.1_202016- 03-01] 61 sequences; 24,872,216 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 6e-12 >seq7 Length=1425097 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || || || || || || ||||| || || | || Sbjct 29761 ATGCAGATTTTCGTCAAGACTCTCACTGGCAAGACCATCACCCTCGAGGTCGAGTCGTCC 29820 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || ||||| || Sbjct 29821 GACACTATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAG 29880 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||||||||| || ||||| || || | | | | || || || ||| Sbjct 29881 CAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAAGACGGTCGTACCCTCTCGGACTACAAC 29940 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || ||||| ||| | || | || |||| || || Sbjct 29941 ATCCAGAAGGAGTCCACACTTCACCTCGTTCTCCGCCTGCGTGGTGG 29987 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/208 (69%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || || || || || || || || || || | | Sbjct 29533 ATGCAGATTTTCGTCAAGACTCTCACTGGCAAGACCATCACCCTTGAGGTCGAGTCTTCG 29592 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || || ||||| || Sbjct 29593 GACACCATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 29652 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||||||||| || ||||| ||||| | | | | || || |||||| Sbjct 29653 CAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGTCGTACCCTCTCGGACTATAAC 29712 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || || ||||| ||||| || || |||| Sbjct 29713 ATCCAGAAGGAGTCGACCCTTCATCTTG 29740 Score = 82.4 bits (90), Expect = 7e-11 Identities = 131/187 (70%), Gaps = 1/187 (1%) Strand=Plus/Plus Query 24725 CTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAA 24784 || ||||| || || || || || || || || | | ||||| | || | || || Sbjct 29326 CTTACCGGCAAGACGATCACTCTTGAGGTTGAGTCTTCGGACACCATCGACAACGTCAAG 29385 Query 24785 CAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGG 24844 |||||||| ||||| || || || || ||||| || || ||| | ||||||||||| Sbjct 29386 GCCAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGTCTCATCTTTGCCGGC 29445 Query 24845 AAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTA 24904 || ||||| ||||| | | | | || || || ||||| |||||||| ||||| || Sbjct 29446 AAGCAGCTCGAGGACGGTCGTACCCTTTCGGACTACAACATCCAAAAGGAGTCGACCCTT 29505 Query 24905 CA-CTTG 24910 || |||| Sbjct 29506 CATCTTG 29512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897256953080