Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20montevideense_20[genbank_20GCA_5F001598995.1_202016- 03-01] 61 sequences; 24,872,216 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq7 89.7 3e-13 >seq7 Length=1425097 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | || | ||| || || ||||||||| ||||| || || ||||| || || Sbjct 29522 AGACGGAGGACAAGATGAAGGGTCGACTCCTTTTGGATGTTGTAGTCCGAAAGGGTACGA 29463 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || || |||||||| || | |||||| ||||| ||||| | |||||| Sbjct 29462 CCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCC 29403 Query 34609 TTGTCTGTGATCTT 34622 ||||| |||||| Sbjct 29402 TTGTCCTGGATCTT 29389 Score = 82.4 bits (90), Expect = 5e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | || | ||| || || |||||| || |||||||| || || || || || Sbjct 29750 AGACGGAGGACAAGATGAAGGGTCGACTCCTTCTGGATGTTATAGTCCGAGAGGGTACGA 29691 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || || |||||||| || | |||||| ||||| ||||| | |||||| Sbjct 29690 CCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGCGGGATGCCCTCC 29631 Query 34609 TTGTC 34613 ||||| Sbjct 29630 TTGTC 29626 Score = 82.4 bits (90), Expect = 5e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || || ||| |||||| || ||||| || || || || || || |||||||||| || Sbjct 29963 TGAAGTGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGACCGTCTTCAAGCTGC 29904 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 || |||||||| || | |||||| ||||| || || | ||||||||||| Sbjct 29903 TTGCCGGCAAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 29854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729366018213