Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20montevideense_20[genbank_20GCA_5F001598995.1_202016- 03-01] 61 sequences; 24,872,216 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 9e-12 >seq7 Length=1425097 Score = 86.0 bits (94), Expect = 9e-12 Identities = 142/203 (70%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || ||||| |||||||| || ||||| || |||||||| || || | || Sbjct 37473 TCGTTGGAGAAAGTGAGGCCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATCGAGGCA 37414 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA- 48301 || || ||||| || || || || || ||||| || || || | || | ||| | | Sbjct 37413 AACGAGCCAGAGAAAAAGATACCCTCGACGGCGGCGAACGCAATGAGGCGCTCAGCAAAG 37354 Query 48302 -ACTGGCT-TCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 || || |||| | ||||| || | ||||| || ||||||||||| | || || Sbjct 37353 GACGAGCGCTCGTCGGAAATCCAACGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGG 37294 Query 48360 ATTGTTTCTATAGCATTAAAGAG 48382 || || || || || || ||||| Sbjct 37293 ATGGTCTCGATGGCCTTGAAGAG 37271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668270315040