Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20porosum_20[genbank_20GCA_5F001600255.1_202016-03-01] 37 sequences; 25,989,348 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 95.1 2e-14 >seq2 Length=4282893 Score = 95.1 bits (104), Expect = 2e-14 Identities = 182/263 (69%), Gaps = 4/263 (2%) Strand=Plus/Minus Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTC-CTTAAGAGTATCAT 94837 ||||| |||| || ||||||||||||||||| | | ||| ||| || || || | Sbjct 3325476 GTGGAGACCGATACCGCCAGCAGTCTTGGAGATC-TGGGCGCAGGTCTTGAGGGTGTCGT 3325418 Query 94838 AAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTG 94897 | ||||| |||||| || || | | | | | |||||||||||| || | ||||| | Sbjct 3325417 AGATACCGTCAATGGAGTCGTCCTTCATGGCGACAAGGAAGCACGACGACATCTGGGG-G 3325359 Query 94898 TGACTGTT-CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATG 94956 ||| | | || || || || ||||| || || || ||||| || || ||||||| Sbjct 3325358 TGAGGGGTACCGGCGTTGAAGAGGGTGGGCGAGGCGTGCGTAAAGTAACGCTCCGACATG 3325299 Query 94957 AGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGC 95016 || | || || || | ||| | |||| ||||| || |||| || |||||| Sbjct 3325298 AGGTTGTAGGTCTCGAGGACCTTGTCAATGTTGTCACCGTGGATACCGATGGCGACACGC 3325239 Query 95017 ATAATCATGTCCTGAGGGCGCTC 95039 |||||||||| ||| || ||||| Sbjct 3325238 ATAATCATGTGCTGGGGACGCTC 3325216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583530875335