Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20porosum_20[genbank_20GCA_5F001600255.1_202016-03-01] 37 sequences; 25,989,348 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 4e-13 >seq3 Length=3276928 Score = 89.7 bits (98), Expect = 4e-13 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 33575 AGATGGGCGACAAGTTTGCATCGT-TCACGGCCCAGAAGGGCACGTGCGGCATGATGTAC 33633 |||| || ||||||||||| ||| |||||| | ||||||| || || || | |||| Sbjct 2385143 AGATTGGAGACAAGTTTGCGTCGCGTCACGGTC-AGAAGGGTACCATTGGTATCACGTAC 2385085 Query 33634 GACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCG 33693 || ||||||||||||||| ||||| || | || || ||| | |||||||||||| Sbjct 2385084 AGGCAAGAGGACATGCCGTTCACTGCCGAGGGTATTGTGCCCGACATTGTCATCAACCCG 2385025 Query 33694 CATGCGTTCCCCTCGCGCATGAC 33716 || || | || ||||| ||||| Sbjct 2385024 CACGCCATTCCGTCGCGTATGAC 2385002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233439360911