Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20porosum_20[genbank_20GCA_5F001600255.1_202016-03-01] 37 sequences; 25,989,348 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq5 102 8e-17 >seq5 Length=2378914 Score = 102 bits (112), Expect = 8e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 |||||||| || | ||| | || | ||| | || ||||| || |||||||| || || Sbjct 2289121 TGGCCGCCACGCAGACGGAGGACCAGGTGGAGGGTCGACTCCTTCTGAATGTTGTAGTCT 2289062 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 | || | ||| |||||||| || || || ||||||| || ||||| |||||| Sbjct 2289061 GAGAGCGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGA 2289002 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || || || || ||||| ||| || || | | || | ||||||| | ||| Sbjct 2289001 GGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATGGTGTCGGACGACTCG 2288942 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| | || | ||||||||||||||| || || ||||| || |||||| Sbjct 2288941 ACCTCGAGAGTAATCGTCTTGCCGGTCAAGGTCTTGACGAAGATCTGCATA 2288891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063770570400