Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20porosum_20[genbank_20GCA_5F001600255.1_202016-03-01] 37 sequences; 25,989,348 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 5e-12 >seq5 Length=2378914 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || ||||||||||| || | ||||| || || || || || || Sbjct 2289088 GTCGACTCCTTCTGAATGTTGTAGTCTGAGAGCGTACGGCCGTCCTCGAGCTGCTTGCCG 2289029 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || ||||| ||||| ||||| || || || ||||| ||||| || Sbjct 2289028 GCGAAGATCAGGCGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTG 2288969 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||||| || ||||| || | || | ||| |||||||||| || Sbjct 2288968 ACGTTGTCAATGGTGTCGGACGACTCGACCTCGAGAGTAATCGTCTTGCCGGTCAAGGTC 2288909 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 2288908 TTGACGAAGATCTGCAT 2288892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134210545644