Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apiotrichum_20porosum_20[genbank_20GCA_5F001600255.1_202016-03-01] 37 sequences; 25,989,348 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 2e-11 >seq3 Length=3276928 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/158 (72%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 138369 TTGTAATACAAGCACGCAAAGTTGGTGTGTAAACCTTCGTCGCGAGAGATAAGTTCGTTG 138428 ||||| |||||||||||||| |||||| ||| || ||||| ||||| || ||||| Sbjct 1613947 TTGTATAGCAAGCACGCAAAGTCGGTGTGGGTACCCTCATCGCGCGAGATGAGCTCGTTT 1613888 Query 138429 CTAAACGTCAGCCCCGGCATGA---CGCCTTTGGTCTTGATGTAAAAGATGGCCGCGAAA 138485 || |||| || |||||| ||| || |||||| | || |||||||| || Sbjct 1613887 GAGAATGTCAATCCGCGCATGAGACCGCGTT---TCTTGAGCCAGAAAATGGCCGCAAAC 1613831 Query 138486 CTGCCCGaaaaaaaaaCGCCTTCGACAATAGCGAAAGC 138523 |||||| || || | ||| |||||| ||||||||| Sbjct 1613830 GAGCCCGAGAAGAAGATGCCCTCGACACAAGCGAAAGC 1613793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002990948520